Cancer Systems Biology Center of HoPE

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21 repositories

FELINE_project
Public
HTML
•6•8•0•0•Updated Nov 28, 2024Nov 28, 2024
PhylinSic_Project
Public
Python
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MIT License
•0•9•4•0•Updated Jul 9, 2024Jul 9, 2024
CAMA1_resistance
Public
Differential expression analysis of CAMA-1 cells in the context of ribociclib resistance and facilitation.
rna-seq evolution scrna-seq cell-lines
R
•0•0•0•0•Updated May 8, 2023May 8, 2023
FacilitationRibociclibBreast
Public
Repository for primary and supplemental resources related to analyses of facilitation between resistant and sensitive ER+ breast cancer cell lineages under cell…
R
•1•0•0•0•Updated Mar 27, 2023Mar 27, 2023
ONC201_Manuscript_2022
Public
R
•0•0•0•0•Updated Dec 7, 2022Dec 7, 2022
Scripts_for_Apollo
Public
Shell
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GNU General Public License v3.0
•0•0•0•0•Updated Nov 19, 2021Nov 19, 2021
01B_Preprocess_DNAseq
Public
R
•0•1•0•0•Updated Oct 20, 2021Oct 20, 2021
02D_scRNAseq_CNV_subclone
Public
0•0•0•0•Updated Apr 1, 2021Apr 1, 2021
02J_scRNAseq_Doublet_Detection
Public
Shell
•0•0•0•0•Updated Mar 22, 2021Mar 22, 2021
03A_scRNA_Archetype_Mutitasklearning_Analysis
Public
R
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GNU General Public License v3.0
•0•1•1•0•Updated Mar 15, 2021Mar 15, 2021
Feng_TME_subclone
Public
C
•0•0•0•0•Updated Sep 23, 2020Sep 23, 2020
scRNA-Seq-Variants-calling
Public
0•2•0•0•Updated Aug 19, 2020Aug 19, 2020
01A_Preprocess_scRNAseq
Public
0•0•0•0•Updated May 29, 2020May 29, 2020
02B_scRNAseq_CellTypeAnnotation
Public
0•0•0•0•Updated May 26, 2020May 26, 2020
02I_scRNAseq_Genotyping
Public
Shell
•0•0•0•0•Updated Feb 25, 2020Feb 25, 2020
02H_WGS_WES_Mutation_Signature
Public
R
•0•0•0•0•Updated Feb 19, 2020Feb 19, 2020
02C_scRNAseq_Pathway
Public
0•0•0•0•Updated Feb 13, 2020Feb 13, 2020
02G_scRNAseq_Differential_Expression
Public
0•0•0•0•Updated Feb 5, 2020Feb 5, 2020
02F_sRNAseq_velocity_analysis
Public
R
•0•0•0•0•Updated Jan 10, 2020Jan 10, 2020
02A_scRNAseq_Seurat
Public
R
•0•0•0•0•Updated Oct 1, 2019Oct 1, 2019
02E_WGS_WES_Subclone
Public
0•0•0•0•Updated Oct 1, 2019Oct 1, 2019