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@arpcard Comprehensive Antibiotic Resistance Database

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    16 repositories

    • rgi

      Public
      Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.
      Python
      •
      Other
      •84•401•2•0•Updated Jan 12, 2026Jan 12, 2026

    • mobio

      Public
      The Mobilome Ontology describes bacterial mobile genetic elements, their mechanisms, and associated epidemiology.
      Makefile
      •3•9•3•0•Updated Oct 2, 2025Oct 2, 2025

    • aro

      Public
      The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of an antibiotic. It reflects the latest curation at CARD.
      obofoundry
      Makefile
      •
      Creative Commons Attribution 4.0 International
      •7•21•2•0•Updated Oct 2, 2025Oct 2, 2025

    • aro-next

      Public
      The next major phase of ARO development has begun, addressing issues of orthogonality and fundamental ontological design. ARO Next development is independent of ongoing curation at CARD.
      Creative Commons Attribution 4.0 International
      •0•3•0•0•Updated Oct 2, 2025Oct 2, 2025

    • viro

      Public
      CARD's draft Virulence Ontology (VIRO) describing bacterial virulence
      Makefile
      •0•1•0•0•Updated Sep 23, 2025Sep 23, 2025

    • rgi_wrapper

      Public
      RGI galaxy project wrapper
      Python
      •2•0•1•1•Updated Sep 23, 2025Sep 23, 2025

    • CARPDM

      Public
      Comprehensive Antibiotic Resistance Probe Design Machine (CARPDM) for design of hybridization probes based on CARD reference sequences.
      Python
      •
      Other
      •2•3•0•0•Updated Sep 23, 2025Sep 23, 2025

    • amr_curation

      Public
      A public repository for collective curation of antimicrobial resistance (AMR) genes and mutations. Submit, discuss, and resolve AMR curation issues.
      7•63•14•0•Updated Sep 23, 2025Sep 23, 2025

    • FAQ

      Public
      Frequently asked questions for CARD, RGI, and ARO.
      1•3•0•0•Updated Aug 5, 2024Aug 5, 2024

    • CARD-ARCS

      Public
      CARD ARCS
      0•0•0•0•Updated Apr 15, 2024Apr 15, 2024

    • card-live-dashboard

      Public
      Python
      •
      Apache License 2.0
      •2•2•6•0•Updated Jul 7, 2023Jul 7, 2023

    • rgi-viz

      Public
      RGI visualization
      0•3•0•0•Updated Dec 14, 2022Dec 14, 2022

    • broadstreet_schema

      Public
      The Broad Street schema is the underlying SQL structure of the Comprehensive Antibiotic Resistance Database
      GNU General Public License v3.0
      •0•1•0•0•Updated Sep 15, 2022Sep 15, 2022

    • alphafold

      Public
      Open source code for AlphaFold.
      Python
      •
      Apache License 2.0
      •2.5k•0•0•0•Updated Aug 13, 2021Aug 13, 2021

    • rgi_database_builder

      Public
      Galaxy data manager for RGI
      Python
      •2•3•0•0•Updated Aug 14, 2018Aug 14, 2018

    • misc

      Public
      Contains miscellaneous scripts
      Python
      •0•0•0•0•Updated May 31, 2017May 31, 2017