BioJava

All

12 repositories

biojava
Public
📖🔬☕ BioJava is an open-source project dedicated to providing a Java library for processing biological data.
java bioinformatics genomics pdb parser-library protein-data-bank protein-structure protein-sequences sequence-alignment protein-modification
Java
•
GNU Lesser General Public License v2.1
•398•619•67•2•Updated Dec 19, 2025Dec 19, 2025
biojava-spark
Public
💥 Algorithms that are built around BioJava and run on Apache Spark
Java
•
GNU Lesser General Public License v2.1
•3•8•0•1•Updated Dec 19, 2025Dec 19, 2025
biojava-http
Public
HTML/JS based user interfaces for BioJava
Java
•6•4•0•2•Updated Dec 19, 2025Dec 19, 2025
biojava-legacy
Public
Legacy BioJava 1 Code
Java
•16•5•4•1•Updated Nov 7, 2025Nov 7, 2025
biojava.github.io
Public
The code for the new BioJava homepage.
SCSS
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Other
•16•4•6•7•Updated Jan 9, 2025Jan 9, 2025
biojava-tutorial
Public
📖📚An introductory tutorial for BioJava
java bioinformatics tutorial genomics protein-structure biojava 3d-structure protein-disorder
Python
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Other
•42•123•4•0•Updated Feb 23, 2024Feb 23, 2024
rcsb-sequenceviewer
Public archive
PDB Amino Acid Sequence Viewer
Java
•4•6•2•1•Updated Feb 8, 2024Feb 8, 2024
rcsb-viewers
Public archive
Biojava based RCSB Viewers
Java
•10•3•2•4•Updated Feb 8, 2024Feb 8, 2024
biojava-adam
Public
Biojava and ADAM integration.
Java
•
GNU Lesser General Public License v3.0
•2•2•3•1•Updated Apr 21, 2023Apr 21, 2023
logo
Public
A repository to host the competition for a new BioJava logo
Other
•5•5•0•0•Updated Mar 12, 2018Mar 12, 2018
biojava-cookbook
Public
Collection of quick 'recipes' for common BioJava tasks
0•1•2•0•Updated Jan 11, 2017Jan 11, 2017
maven-repo
Public
A BioJava specific maven repository, mostly for legacy releases, since all new releases are on Maven Central
GNU Lesser General Public License v2.1
•0•1•0•0•Updated Apr 21, 2016Apr 21, 2016