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    16 repositories

    • matam

      Public
      Mapping-Assisted Targeted-Assembly for Metagenomics
      bioinformaticsassemblymetagenomicsrrna
      Python
      •
      GNU Affero General Public License v3.0
      •11•25•44•0•Updated Mar 28, 2025Mar 28, 2025

    • Porechop_ABI

      Public
      Adapter trimmer for Oxford Nanopore reads using ab initio method
      C++
      •
      GNU General Public License v3.0
      •135•57•8•0•Updated Nov 21, 2024Nov 21, 2024

    • iedera

      Public
      subset and spaced seed design tool
      C++
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated May 28, 2024May 28, 2024

    • yass

      Public
      genomic alignment similarity search tool
      C
      •
      GNU General Public License v3.0
      •6•1•0•0•Updated May 28, 2024May 28, 2024

    • ComponentSearch2

      Public
      C++
      •
      GNU Affero General Public License v3.0
      •1•0•0•0•Updated Mar 27, 2023Mar 27, 2023

    • sortmerna

      Public
      SortMeRNA: next-generation sequence filtering and alignment tool
      C++
      •
      GNU General Public License v3.0
      •65•0•0•0•Updated Apr 2, 2020Apr 2, 2020

    • DiNAMO

      Public
      Discriminative DNA IUPAC motif discovery tool
      C++
      •
      GNU Affero General Public License v3.0
      •1•5•4•0•Updated Jun 13, 2018Jun 13, 2018

    • conda_recipes

      Public
      Shell
      •0•0•0•0•Updated Oct 12, 2017Oct 12, 2017

    • aln2gfa2

      Public
      Python
      •0•0•0•0•Updated Aug 31, 2017Aug 31, 2017

    • stage_ambre

      Public
      Python
      •0•0•0•0•Updated Aug 31, 2017Aug 31, 2017

    • ComponentSearch3

      Public
      C++
      •
      GNU General Public License v3.0
      •1•2•0•0•Updated Jul 13, 2017Jul 13, 2017

    • read2aln

      Public
      Python
      •0•0•0•0•Updated Jul 6, 2017Jul 6, 2017

    • RNANR

      Public
      A software for determining secondary structures within RNA and their non-redundant sampling.
      C
      •2•0•0•0•Updated May 11, 2017May 11, 2017

    • vidjil

      Public
      Vidjil -- High-throughput Analysis of V(D)J Immune Repertoire
      JavaScript
      •7•0•0•0•Updated Jan 13, 2017Jan 13, 2017

    • ComponentSearch

      Public
      ContigSearch
      Java
      •1•0•1•0•Updated Oct 10, 2016Oct 10, 2016

    • Smiles2Monomers

      Public
      A tool to rely chemical structures to biological structures
      Java
      •
      GNU Affero General Public License v3.0
      •7•0•0•0•Updated May 17, 2016May 17, 2016