Repositories list

• encore

  Public
  Reproducing the key findings of papers from open data on the DANDI Archive, by agents and people

  Jupyter Notebook

  •

  Apache License 2.0

  •11 fork in catalystneuro/encore•00 stars in catalystneuro/encore•88 issues in catalystneuro/encore•55 pull requests in catalystneuro/encore•Updated Oct 28, 2026Oct 28, 2026

• neuroconv

  Public
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.

  Python

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  BSD 3-Clause "New" or "Revised" License

  •4242 forks in catalystneuro/neuroconv•8181 stars in catalystneuro/neuroconv•8989 issues in catalystneuro/neuroconv•3131 pull requests in catalystneuro/neuroconv•Updated Oct 28, 2026Oct 28, 2026

• llm-frontier

  Public
  Tracks how cheaply each level of LLM capability can be bought, from Artificial Analysis measured cost per task. Powers catalystneuro.com/llm-cost-frontier

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •00 forks in catalystneuro/llm-frontier•33 stars in catalystneuro/llm-frontier•11 issue in catalystneuro/llm-frontier•22 pull requests in catalystneuro/llm-frontier•Updated Oct 28, 2026Oct 28, 2026

• roiextractors

  Public
  Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by SpikeInterface.

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •1313 forks in catalystneuro/roiextractors•1818 stars in catalystneuro/roiextractors•2323 issues in catalystneuro/roiextractors•44 pull requests in catalystneuro/roiextractors•Updated Oct 28, 2026Oct 28, 2026

• find_reuse

  Public
  Python

  •11 fork in catalystneuro/find_reuse•22 stars in catalystneuro/find_reuse•66 issues in catalystneuro/find_reuse•88 pull requests in catalystneuro/find_reuse•Updated Oct 27, 2026Oct 27, 2026

• neurodata-ai-website

  Public
  Website of the NeuroData AI Summer School (formerly NeuroDataReHack)

  Astro

  •00 forks in catalystneuro/neurodata-ai-website•00 stars in catalystneuro/neurodata-ai-website•00 issues in catalystneuro/neurodata-ai-website•44 pull requests in catalystneuro/neurodata-ai-website•Updated Oct 27, 2026Oct 27, 2026

• pagan-lab-to-nwb

  Public
  NWB Conversion project for the Pagan lab.

  Jupyter Notebook

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  MIT License

  •11 fork in catalystneuro/pagan-lab-to-nwb•00 stars in catalystneuro/pagan-lab-to-nwb•33 issues in catalystneuro/pagan-lab-to-nwb•77 pull requests in catalystneuro/pagan-lab-to-nwb•Updated Oct 27, 2026Oct 27, 2026

• claude-skills

  Public
  Public repository of skills for neurophysiology research

  Python

  •

  MIT License

  •11 fork in catalystneuro/claude-skills•33 stars in catalystneuro/claude-skills•22 issues in catalystneuro/claude-skills•22 pull requests in catalystneuro/claude-skills•Updated Oct 27, 2026Oct 27, 2026

• shadowzarr

  Public
  Represent remote HDF5 NWB files as Zarr v3 via JSON reference file systems

  Python

  •22 forks in catalystneuro/shadowzarr•00 stars in catalystneuro/shadowzarr•00 issues in catalystneuro/shadowzarr•22 pull requests in catalystneuro/shadowzarr•Updated Oct 26, 2026Oct 26, 2026

• IBL-to-nwb

  Public
  Conversion of IBL data to NWB format.

  nwb-conversion

  nwb-conversion

  Jupyter Notebook

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  BSD 3-Clause "New" or "Revised" License

  •66 forks in catalystneuro/IBL-to-nwb•33 stars in catalystneuro/IBL-to-nwb•11 issue in catalystneuro/IBL-to-nwb•11 pull request in catalystneuro/IBL-to-nwb•Updated Oct 26, 2026Oct 26, 2026

• hnasko-lab-to-nwb

  Public
  NWB Conversion project for the Hnasko Lab

  Jupyter Notebook

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  MIT License

  •00 forks in catalystneuro/hnasko-lab-to-nwb•00 stars in catalystneuro/hnasko-lab-to-nwb•22 issues in catalystneuro/hnasko-lab-to-nwb•1313 pull requests in catalystneuro/hnasko-lab-to-nwb•Updated Oct 26, 2026Oct 26, 2026

• dandi-semantic-atlas

  Public
  TypeScript

  •00 forks in catalystneuro/dandi-semantic-atlas•00 stars in catalystneuro/dandi-semantic-atlas•00 issues in catalystneuro/dandi-semantic-atlas•1313 pull requests in catalystneuro/dandi-semantic-atlas•Updated Oct 26, 2026Oct 26, 2026

• example-notebooks

  Public
  Jupyter Notebook

  •

  Apache License 2.0

  •2020 forks in catalystneuro/example-notebooks•00 stars in catalystneuro/example-notebooks•00 issues in catalystneuro/example-notebooks•22 pull requests in catalystneuro/example-notebooks•Updated Oct 26, 2026Oct 26, 2026

• goatcounter-dashboard

  Public
  Static, backend-free dashboard for GoatCounter analytics

  dashboardanalyticsgoatcounter

  dashboardanalyticsgoatcounter

  TypeScript

  •

  MIT License

  •00 forks in catalystneuro/goatcounter-dashboard•00 stars in catalystneuro/goatcounter-dashboard•00 issues in catalystneuro/goatcounter-dashboard•22 pull requests in catalystneuro/goatcounter-dashboard•Updated Oct 26, 2026Oct 26, 2026

• shenoy-lab-to-nwb

  Public
  Python

  •

  MIT License

  •00 forks in catalystneuro/shenoy-lab-to-nwb•22 stars in catalystneuro/shenoy-lab-to-nwb•44 issues in catalystneuro/shenoy-lab-to-nwb•11 pull request in catalystneuro/shenoy-lab-to-nwb•Updated Oct 25, 2026Oct 25, 2026

• catalystneuro.github.io

  Public
  Astro

  •00 forks in catalystneuro/catalystneuro.github.io•00 stars in catalystneuro/catalystneuro.github.io•00 issues in catalystneuro/catalystneuro.github.io•11 pull request in catalystneuro/catalystneuro.github.io•Updated Oct 23, 2026Oct 23, 2026

• dandi-reanalysis-examples

  Public
  Full output of the example reanalyses on our SfN 2026 poster, made with the analyzing-dandi-datasets skill

  Jupyter Notebook

  •00 forks in catalystneuro/dandi-reanalysis-examples•00 stars in catalystneuro/dandi-reanalysis-examples•00 issues in catalystneuro/dandi-reanalysis-examples•00 pull requests in catalystneuro/dandi-reanalysis-examples•Updated Oct 22, 2026Oct 22, 2026

• turner-lab-to-nwb

  Public
  NWB Conversion project for the Turner lab at the University of Pittsburgh.

  Jupyter Notebook

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  MIT License

  •00 forks in catalystneuro/turner-lab-to-nwb•00 stars in catalystneuro/turner-lab-to-nwb•55 issues in catalystneuro/turner-lab-to-nwb•22 pull requests in catalystneuro/turner-lab-to-nwb•Updated Oct 22, 2026Oct 22, 2026

• lerner-lab-to-nwb

  Public
  Python

  •

  MIT License

  •11 fork in catalystneuro/lerner-lab-to-nwb•00 stars in catalystneuro/lerner-lab-to-nwb•33 issues in catalystneuro/lerner-lab-to-nwb•00 pull requests in catalystneuro/lerner-lab-to-nwb•Updated Oct 22, 2026Oct 22, 2026

• gonzalez-sulser-lab-to-nwb

  Public
  Conversion of chronic EEG/EMG recordings from the Gonzalez-Sulser lab (University of Edinburgh) to NWB. Part of the SFARI Autism Rat Models Consortium (ARC).

  Jupyter Notebook

  •00 forks in catalystneuro/gonzalez-sulser-lab-to-nwb•00 stars in catalystneuro/gonzalez-sulser-lab-to-nwb•11 issue in catalystneuro/gonzalez-sulser-lab-to-nwb•22 pull requests in catalystneuro/gonzalez-sulser-lab-to-nwb•Updated Oct 21, 2026Oct 21, 2026

• peyrache-lab-to-nwb

  Public
  NWB conversion scripts for the Peyrache lab. Part of the SFARI Autism Rat Models Consortium (ARC).

  Jupyter Notebook

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  BSD 3-Clause "New" or "Revised" License

  •00 forks in catalystneuro/peyrache-lab-to-nwb•00 stars in catalystneuro/peyrache-lab-to-nwb•00 issues in catalystneuro/peyrache-lab-to-nwb•00 pull requests in catalystneuro/peyrache-lab-to-nwb•Updated Oct 21, 2026Oct 21, 2026

• nwb-convert-benchmark-results

  Public
  Full results of the nwb-convert benchmark shown on our SfN 2026 poster

  00 forks in catalystneuro/nwb-convert-benchmark-results•00 stars in catalystneuro/nwb-convert-benchmark-results•00 issues in catalystneuro/nwb-convert-benchmark-results•00 pull requests in catalystneuro/nwb-convert-benchmark-results•Updated Oct 19, 2026Oct 19, 2026

• higley-lab-to-nwb

  Public
  NWB Conversion project for the Higley lab

  Python

  •

  MIT License

  •00 forks in catalystneuro/higley-lab-to-nwb•00 stars in catalystneuro/higley-lab-to-nwb•55 issues in catalystneuro/higley-lab-to-nwb•11 pull request in catalystneuro/higley-lab-to-nwb•Updated Oct 19, 2026Oct 19, 2026

• oconnor-lab-to-nwb

  Public
  Python

  •

  MIT License

  •00 forks in catalystneuro/oconnor-lab-to-nwb•11 star in catalystneuro/oconnor-lab-to-nwb•33 issues in catalystneuro/oconnor-lab-to-nwb•11 pull request in catalystneuro/oconnor-lab-to-nwb•Updated Oct 19, 2026Oct 19, 2026

• hanks-lab-to-nwb

  Public
  Conversion of fiber photometry and behavioral data from the Hanks lab (UC Davis) to NWB. Part of the SFARI Autism Rat Models Consortium (ARC).

  Jupyter Notebook

  •

  MIT License

  •00 forks in catalystneuro/hanks-lab-to-nwb•00 stars in catalystneuro/hanks-lab-to-nwb•11 issue in catalystneuro/hanks-lab-to-nwb•00 pull requests in catalystneuro/hanks-lab-to-nwb•Updated Oct 19, 2026Oct 19, 2026

• buzsaki-lab-to-nwb

  Public
  nwb

  nwb

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •11 fork in catalystneuro/buzsaki-lab-to-nwb•11 star in catalystneuro/buzsaki-lab-to-nwb•1111 issues in catalystneuro/buzsaki-lab-to-nwb•22 pull requests in catalystneuro/buzsaki-lab-to-nwb•Updated Oct 19, 2026Oct 19, 2026

• reimer-arenkiel-lab-to-nwb

  Public
  Reimer-Arenkiel lab conversion to NWB

  Python

  •

  MIT License

  •11 fork in catalystneuro/reimer-arenkiel-lab-to-nwb•00 stars in catalystneuro/reimer-arenkiel-lab-to-nwb•22 issues in catalystneuro/reimer-arenkiel-lab-to-nwb•11 pull request in catalystneuro/reimer-arenkiel-lab-to-nwb•Updated Oct 19, 2026Oct 19, 2026

• dombeck-lab-to-nwb

  Public
  NWB Conversion project for the Dombeck lab at Northwestern University.

  Jupyter Notebook

  •

  MIT License

  •00 forks in catalystneuro/dombeck-lab-to-nwb•00 stars in catalystneuro/dombeck-lab-to-nwb•77 issues in catalystneuro/dombeck-lab-to-nwb•11 pull request in catalystneuro/dombeck-lab-to-nwb•Updated Oct 19, 2026Oct 19, 2026

• datta-lab-to-nwb

  Public
  Python

  •

  MIT License

  •11 fork in catalystneuro/datta-lab-to-nwb•11 star in catalystneuro/datta-lab-to-nwb•11 issue in catalystneuro/datta-lab-to-nwb•11 pull request in catalystneuro/datta-lab-to-nwb•Updated Oct 19, 2026Oct 19, 2026

• spyglass

  Public
  Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF

  Jupyter Notebook

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  MIT License

  •6161 forks in catalystneuro/spyglass•00 stars in catalystneuro/spyglass•00 issues in catalystneuro/spyglass•00 pull requests in catalystneuro/spyglass•Updated Oct 19, 2026Oct 19, 2026