Repositories list

• hiv_wide

  Public
  pol vs whole analyses

  HTML

  •1•0•0•0•Updated Sep 18, 2025Sep 18, 2025

• physalia-dispersal-data

  Public
  Python

  •0•0•0•0•Updated Aug 12, 2025Aug 12, 2025

• nanomia_genome

  Public
  Jupyter Notebook

  •0•0•1•0•Updated May 1, 2025May 1, 2025

• siphonophores

  Public
  0•1•0•0•Updated Oct 18, 2024Oct 18, 2024

• siphweb_metabarcoding

  Public
  R

  •1•1•0•0•Updated Oct 15, 2024Oct 15, 2024

• siph_skimming

  Public
  HTML

  •0•0•0•0•Updated Mar 22, 2024Mar 22, 2024

• cellphylo

  Public
  Shell

  •3•14•0•0•Updated Mar 8, 2024Mar 8, 2024

• isoseq

  Public
  Python

  •1•1•2•0•Updated Feb 15, 2024Feb 15, 2024

• lullaby

  Public
  A monitor system for laboratory hardware, including ridges, freezers, and incubators

  C

  •0•1•4•0•Updated Jul 11, 2023Jul 11, 2023

• dunnlab_resources

  Public
  0•0•0•0•Updated Sep 11, 2022Sep 11, 2022

• animal_tree_root

  Public
  HTML

  •2•3•0•0•Updated Sep 1, 2022Sep 1, 2022

• phylip

  Public
  C

  •3•6•4•0•Updated May 12, 2022May 12, 2022

• tentilla_morph

  Public
  C

  •0•0•0•0•Updated Apr 1, 2022Apr 1, 2022

• tentilla_organismal

  Public
  Repository for code and data associated to "Damian-Serrano et. al -- The Evolutionary History of Siphonophore Tentilla: Novelties, Convergence, and Integration"

  R

  •0•0•0•0•Updated Apr 1, 2022Apr 1, 2022

• Siphonophore_Expression

  Public
  Shell

  •2•0•0•0•Updated Jan 26, 2022Jan 26, 2022

• equipment_monitor

  Public
  A monitor system for laboratory hardware, including ridges, freezers, and incubators

  C

  •0•0•4•0•Updated Dec 20, 2021Dec 20, 2021

• siphweb_metabarcoding_draft

  Public
  Metabarcoding analysis pipelines and scripts

  HTML

  •0•0•0•0•Updated Dec 1, 2021Dec 1, 2021

• gene_selection

  Public
  R

  •0•0•0•0•Updated Sep 8, 2021Sep 8, 2021

• phylopytho

  Public
  Phylogenetic tools written in python

  Python

  •

  GNU General Public License v3.0

  •0•1•1•0•Updated Aug 2, 2021Aug 2, 2021

• Testing_the_ortholog_conjecture

  Public
  R

  •

  GNU General Public License v2.0

  •2•0•1•0•Updated Mar 6, 2021Mar 6, 2021

• pip_env

  Public
  example pip+venv

  Shell

  •

  MIT License

  •0•0•0•0•Updated Feb 24, 2021Feb 24, 2021

• ubuntu-dev

  Public
  Build, debug, and profile code in an Ubuntu container

  0•0•0•0•Updated Jan 12, 2021Jan 12, 2021

• UNCALLED

  Public
  Raw nanopore signal mapper that enables real-time targeted sequencing

  C++

  •

  MIT License

  •45•0•0•0•Updated Dec 22, 2020Dec 22, 2020

• pbmpi

  Public
  phylobayes mpi

  C++

  •

  GNU General Public License v2.0

  •8•0•0•0•Updated Jul 14, 2020Jul 14, 2020

• gene_inventory_2018

  Public
  analysis to accompany eLife Insight piece 2018

  R

  •

  MIT License

  •1•0•0•0•Updated Jul 16, 2018Jul 16, 2018

• siphweb

  Public
  0•0•0•0•Updated Jun 7, 2018Jun 7, 2018

• linux-anvil

  Public
  Repository to host the Docker image used to build dunnlab conda packages

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •56•0•0•0•Updated Apr 26, 2018Apr 26, 2018