Repositories list

• band-containers

  Public
  Dockerfile

  •

  MIT License

  •00 forks•00 stars•1111 issues•00 pull requests•Updated May 26, 2026May 26, 2026

• bard-containers

  Public
  Container recipes for the BARD virtual desktop

  Dockerfile

  •

  GNU General Public License v3.0

  •00 forks•33 stars•00 issues•00 pull requests•Updated Dec 16, 2025Dec 16, 2025

• bard-deployment

  Public
  Makefile

  •00 forks•22 stars•11 issue•00 pull requests•Updated Dec 8, 2025Dec 8, 2025

• band

  Public
  Jinja

  •

  GNU General Public License v3.0

  •00 forks•22 stars•1212 issues•00 pull requests•Updated Dec 8, 2025Dec 8, 2025

• microglia-morphometry

  Public
  Java

  •33 forks•1313 stars•77 issues•11 pull request•Updated Jun 27, 2025Jun 27, 2025

• spindle3d

  Public
  Java

  •00 forks•00 stars•1212 issues•00 pull requests•Updated May 14, 2025May 14, 2025

• elastix-wrapper

  Public
  Java

  •

  BSD 2-Clause "Simplified" License

  •33 forks•1515 stars•1010 issues•00 pull requests•Updated Feb 5, 2025Feb 5, 2025

• imagej-utils

  Public
  Java

  •

  BSD 2-Clause "Simplified" License

  •44 forks•22 stars•2727 issues•00 pull requests•Updated May 3, 2024May 3, 2024

• bd-cellview

  Public
  Java

  •00 forks•55 stars•1010 issues•00 pull requests•Updated Mar 6, 2024Mar 6, 2024

• cats

  Public
  Java

  •

  Other

  •22 forks•11 star•2424 issues•00 pull requests•Updated Nov 22, 2023Nov 22, 2023

• DNA-FISH

  Public
  Java

  •00 forks•11 star•1616 issues•00 pull requests•Updated Jul 3, 2023Jul 3, 2023

• plateviewer

  Public
  Java

  •22 forks•44 stars•1010 issues•11 pull request•Updated Feb 19, 2023Feb 19, 2023

• metaimage-io

  Public
  Java

  •

  BSD 2-Clause "Simplified" License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Aug 31, 2022Aug 31, 2022

• ngff

  Public
  Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.

  Bikeshed

  •

  Other

  •6868 forks•00 stars•00 issues•00 pull requests•Updated Jul 18, 2022Jul 18, 2022

• fly-reg

  Public
  Java

  •

  BSD 2-Clause "Simplified" License

  •11 fork•00 stars•44 issues•00 pull requests•Updated Feb 8, 2022Feb 8, 2022

• shinyHTM

  Public
  R

  •22 forks•33 stars•66 issues•00 pull requests•Updated Oct 7, 2020Oct 7, 2020

• list-of-update-sites

  Public
  The update sites ImageJ knows about automatically

  Python

  •110110 forks•00 stars•00 issues•00 pull requests•Updated Jun 16, 2020Jun 16, 2020

• imagej-courses

  Public
  Python

  •

  Creative Commons Attribution Share Alike 4.0 International

  •66 forks•1919 stars•2121 issues•00 pull requests•Updated Feb 27, 2020Feb 27, 2020