Repositories list

• globalbioticinteractions.github.io

  Public
  source files for GloBI website

  HTML

  •

  MIT License

  •1414 forks•1010 stars•77 issues•1010 pull requests•Updated Jun 13, 2026Jun 13, 2026

• globinizer

  Public
  Checks whether datasets are ready for GloBI indexing

  Shell

  •

  MIT License

  •22 forks•11 star•00 issues•00 pull requests•Updated Jun 11, 2026Jun 11, 2026

• rebillard2026

  Public
  index configuration for Rebillard, A., Jannel, A., Marchetti, L. et al. Early Permian terrestrial apex predator regurgitalite indicates opportunistic feeding be…

  00 forks•00 stars•00 issues•00 pull requests•Updated Jun 11, 2026Jun 11, 2026

• dopi

  Public
  index configuration to help GloBI index The Database of Pollinator Interactions (DoPI) documents British pollinator-plant associations at https://www.sussex.ac.…

  00 forks•00 stars•33 issues•00 pull requests•Updated Jun 9, 2026Jun 9, 2026

• nomer

  Public
  maps identifiers and names to other identifiers and names

  HTML

  •

  GNU General Public License v3.0

  •44 forks•2222 stars•7575 issues•00 pull requests•Updated Jun 5, 2026Jun 5, 2026

• globalbioticinteractions

  Public
  Global Biotic Interactions provides access to existing species interaction datasets

  bioinformaticsparasitesbiology+ 11

  bioinformaticsparasitesbiologydietecologybiodiversitydiseaseseoletl-frameworkfood-webs+ 4

  Java

  •

  GNU General Public License v3.0

  •1818 forks•143143 stars•419419 issues•11 pull request•Updated Jun 2, 2026Jun 2, 2026

• elton

  Public
  Access, review and index existing species interaction datasets

  Java

  •

  GNU General Public License v3.0

  •33 forks•66 stars•2121 issues•00 pull requests•Updated May 27, 2026May 27, 2026

• globi-server-scripts

  Public
  bash scripts used for GloBI server

  Shell

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 26, 2026May 26, 2026

• zover

  Public
  GloBI configuration to index Siyu Zhou, Bo Liu, Yelin Han, Yuyang Wang, Lihong Chen, Zhiqiang Wu, Jian Yang, ZOVER: the database of zoonotic and vector-borne vi…

  00 forks•00 stars•11 issue•00 pull requests•Updated May 25, 2026May 25, 2026

• globi-taxon-names

  Public
  list of manual taxonomic name mappings and taxonomic stop words

  MIT License

  •00 forks•00 stars•1414 issues•00 pull requests•Updated May 21, 2026May 21, 2026

• wood2023

  Public
  index configuration for Wood, T.J., Müller, A., Praz, C. et al. Elevated rates of dietary generalization in eusocial lineages of the secondarily herbivorous bee…

  00 forks•00 stars•00 issues•00 pull requests•Updated May 13, 2026May 13, 2026

• walton2020

  Public
  index configuration for Richard E. Walton, Carl D. Sayer, Helen Bennion, Jan C. Axmacher; Nocturnal pollinators strongly contribute to pollen transport of wild …

  00 forks•00 stars•00 issues•00 pull requests•Updated May 12, 2026May 12, 2026

• globi-review-corpus

  Public
  Tools to help track and access reviewed species interaction datasets

  TeX

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 5, 2026May 5, 2026

• gbif-us-bees

  Public
  index configuration for GBIF-US Bee Datasets

  00 forks•00 stars•00 issues•00 pull requests•Updated May 4, 2026May 4, 2026

• usgs-pollinator-library

  Public
  Configuration to help Global Biotic Interactions (GloBI, https://globalbioticinteractions.org) index the United States Geological Survey (USGS) Pollinator Libra…

  00 forks•00 stars•00 issues•00 pull requests•Updated May 4, 2026May 4, 2026

• usgs-bison

  Public
  Configuration for GloBI to index USGS Biodiversity Information Serving Our Nation (BISON) IPT

  00 forks•00 stars•11 issue•00 pull requests•Updated May 4, 2026May 4, 2026

• inaturalist

  Public
  Helps GloBI to index species interaction data found in https://inaturalist.org

  44 forks•33 stars•77 issues•00 pull requests•Updated May 4, 2026May 4, 2026

• taxon-graph-builder

  Public
  Builder for Global Biotic Interactions Taxon Graph

  Makefile

  •

  GNU General Public License v3.0

  •11 fork•00 stars•00 issues•00 pull requests•Updated Apr 30, 2026Apr 30, 2026

• name-alignment-template

  Public template
  align names with known taxonomic resources

  Creative Commons Zero v1.0 Universal

  •66 forks•44 stars•55 issues•00 pull requests•Updated Apr 30, 2026Apr 30, 2026

• afromoths

  Public
  index configuration for De Prins, J., & De Prins, W. (2026). Afromoths, online database of Afrotropical moth species (Lepidoptera) (Version 2026-03-01). Belgian…

  00 forks•00 stars•00 issues•00 pull requests•Updated Apr 21, 2026Apr 21, 2026

• template-dataset

  Public template
  Template species interaction data repository compatible with globalbioticinteractions.org

  biologyspeciesinteractions+ 4

  biologyspeciesinteractionsecologyglobibioticglobalbioticinteractions

  2222 forks•88 stars•00 issues•00 pull requests•Updated Apr 14, 2026Apr 14, 2026

• life4pollinators

  Public
  GloBI index configuration associated with Barberis et al. (2025). Insect-flower interactions in the Mediterranean area: a Citizen Science dataset collated withi…

  00 forks•00 stars•00 issues•00 pull requests•Updated Apr 10, 2026Apr 10, 2026

• homebrew-globi

  Public
  Formula to help install GloBI tools on Mac OS

  Ruby

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 7, 2026Apr 7, 2026

• beefunc

  Public
  configuration for GloBI to index Aubouin, L., Genoud, D., Givord-Coupeau, B. et al. BeeFunc, a comprehensive trait database for French bees. Sci Data 12, 1302 (…

  TeX

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 11, 2026Mar 11, 2026

• carvajal-quintero-2026

  Public
  configuration to help index Carvajal-Quintero, J.D. et al. 2026. Degradation of fish food webs in the Anthropocene. Science Advances. https://doi.org/10.1126/sc…

  TeX

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 4, 2026Mar 4, 2026

• review-corpus-builder

  Public
  workflows to compile a data review corpus

  Shell

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 26, 2026Feb 26, 2026

• hafer-hahmann-2026

  Public
  index configuration for Hafer-Hahmann N. The Evolution and Ecology of Host Manipulation in Helminth Parasites: A Phylogenetic Meta-Analysis. Ecol Lett. 2026 Feb…

  00 forks•00 stars•00 issues•00 pull requests•Updated Feb 25, 2026Feb 25, 2026

• russo2022

  Public
  index configuration for Russo, Laura; Fitzpatrick, Una; Larkin, Michelle et al. (2022). Database of plant-flower visitor interactions from Ireland [Dataset]. Dr…

  TeX

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 19, 2026Feb 19, 2026

• bees-of-ireland

  Public
  index configuration for Úna Fitzpatrick. 2025. Bees of Ireland. National Biodiversity Data Centre. https://maps.biodiversityireland.ie/Dataset/5 https://gbif.bi…

  00 forks•00 stars•00 issues•00 pull requests•Updated Feb 18, 2026Feb 18, 2026

• syrphids-of-ireland

  Public
  index configuration for Martin Speight, M. and Gittings, T.. 2025. Data on the distribution of Irish hoverflies. National Biodiversity Data Centre. https://maps…

  00 forks•00 stars•00 issues•00 pull requests•Updated Feb 13, 2026Feb 13, 2026