Intelligent Medical Systems Research Group

All

26 repositories

stambo
Public
Statistical model comparison with bootstrap and beyond
Jupyter Notebook
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MIT License
•1•32•0•0•Updated Dec 8, 2025Dec 8, 2025
KNEEL
Public
Hourglass Networks for Knee Anatomical Landmark Localization: PyTorch Implementation
deep-learning pytorch landmark-detection landmark-detectors knee landmark-recognition osteoarthritis knee-joints knee-osteoarthritis-analysis
Python
•10•50•0•6•Updated Dec 6, 2025Dec 6, 2025
midl-2026-compare-everything
Public
Simulation codes for MIDL 2026 submission Comparing Everything Everywhere All at Once in Medical Image Analysis
MIT License
•0•0•0•0•Updated Dec 3, 2025Dec 3, 2025
spineslicer
Public
HTML
•0•0•0•0•Updated Oct 1, 2025Oct 1, 2025
mice_uterine_gland_segmentation
Public
Python
•0•0•0•0•Updated Jun 18, 2025Jun 18, 2025
solt
Public
Streaming over lightweight data transformations
deep-learning image-recognition image-segmentation landmark-detection data-augmentation
Jupyter Notebook
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MIT License
•20•265•10•2•Updated Jun 1, 2025Jun 1, 2025
DeepKnee
Public
Codes for paper: Automatic Knee Osteoarthritis Diagnosis from Plain Radiographs: A Deep Learning-Based Approach
deep-learning pytorch medical radiology biomedical-engineering knee osteoarthritis radiographs attention-maps
Python
•34•75•3•0•Updated Mar 6, 2025Mar 6, 2025
OAProgressionMMF
Public
Prediction of knee osteoarthritis progression from multimodal data
Python
•1•6•0•0•Updated Feb 6, 2025Feb 6, 2025
OAProgressionMR
Public
Prediction of knee osteoarthritis progression from DESS MRI
Python
•4•8•1•0•Updated Feb 4, 2025Feb 4, 2025
SAUNA
Public
SAUNA: Image-level Regression for Uncertainty-aware Retinal Image Segmentation
Python
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MIT License
•0•8•1•0•Updated Dec 20, 2024Dec 20, 2024
LoG-VMamba
Public
LoG-VMamba: Local-Global Vision Mamba for Medical Image Segmentation
Python
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MIT License
•1•26•0•0•Updated Oct 18, 2024Oct 18, 2024
SiNGR
Public
SiNGR: Brain Tumor Segmentation via Signed Normalized Geodesic Transform Regression
Python
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MIT License
•3•10•1•0•Updated Aug 28, 2024Aug 28, 2024
lsmodels
Public
Lumbar Spine Models for Segmentation and Grading
0•0•0•0•Updated Aug 5, 2024Aug 5, 2024
DeepWrist
Public
Deep Learning Pipeline for Wrist Fracture Detection
Python
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Other
•1•11•3•0•Updated Feb 16, 2024Feb 16, 2024
semixup
Public
Semixup: In- and Out-of-Manifold Regularization for Deep Semi-Supervised Knee Osteoarthritis Severity Grading from Plain Radiographs
regularization knee-osteoarthritis-analysis semixup in-and-out-of-manifold deep-semi-supervise-learning
Python
•6•14•0•2•Updated Oct 3, 2023Oct 3, 2023
contrib
Public
All the public/open source software components for Aivero (GitLab Mirror)
Rust
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MIT License
•3•0•0•0•Updated May 3, 2023May 3, 2023
CLIMATv2
Public
CLIMATv2: Clinically-Inspired Multi-Agent Transformers for Disease Trajectory Forecasting from Multimodal Data
Python
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MIT License
•2•20•1•0•Updated Nov 1, 2022Nov 1, 2022
ISBI2023_PfirrmannGrading
Public
Project Page for ISBI 2023 Submission
HTML
•0•0•0•0•Updated Oct 19, 2022Oct 19, 2022
PfirrmannGrading
Public
Python
•0•1•1•0•Updated Oct 14, 2022Oct 14, 2022
greedy_ensembles_training
Public
Greedy Bayesian Posterior Approximation with Deep Ensembles. A. Tiulpin and M. B. Blaschko. (2021)
Python
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Apache License 2.0
•3•11•0•0•Updated Jul 18, 2022Jul 18, 2022
CLIMAT
Public
CLIMAT: Clinically-Inspired Multi-Agent Transformers for Disease Trajectory Forecasting from Multi-modal Data
Python
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MIT License
•0•6•1•0•Updated May 3, 2022May 3, 2022
AdaTriplet
Public
AdaTriplet loss & automargin method
Python
•0•19•2•0•Updated Mar 8, 2022Mar 8, 2022
OAProgression
Public
Multimodal Machine Learning-based Knee Osteoarthritis Progression Prediction from Plain Radiographs and Clinical Data
medicine deep-learning reproducible-research pytorch radiology clinical-data clinical-decision-support osteoarthritis disease-progression
Python
•20•83•1•0•Updated Jan 3, 2022Jan 3, 2022
KneeOARSIGrading
Public
Grading individual knee osteoarthritis features using Deep Learning
Python
•2•21•0•0•Updated Oct 25, 2020Oct 25, 2020
pytorch_bn_fusion
Public archive
Batch normalization fusion for PyTorch. This is an archived repository, which is not maintained.
deep-neural-networks deep-learning pytorch batch-normalization inference-optimization
Python
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MIT License
•29•196•2•1•Updated Apr 6, 2020Apr 6, 2020
KneeLocalizer
Public
Codes for paper: A novel method for automatic localization of joint area on knee plain radiographs by A. Tiulpin et. al.
medicine computer-vision detection knee osteoarthritis radiographs
Python
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MIT License
•12•15•2•0•Updated Nov 27, 2018Nov 27, 2018