InstaDeep Ltd

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67 repositories

nucleotide-transformer
Public
Foundation Models for Genomics & Transcriptomics
deep-learning genomics biology dna transformer transcriptomics foundation-models
Jupyter Notebook
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Other
•70•637•2•0•Updated Jun 13, 2025Jun 13, 2025
emmo
Public
Unsupervised method for mhc2 motif deconvolution based on MoDec
Python
•0•0•0•0•Updated Jun 13, 2025Jun 13, 2025
InstaNovo
Public
De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments
Python
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Apache License 2.0
•21•88•5•1•Updated Jun 13, 2025Jun 13, 2025
jumanji
Public
🕹️ A diverse suite of scalable reinforcement learning environments in JAX
python research reinforcement-learning jax
Python
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Apache License 2.0
•91•733•26•1•Updated Jun 9, 2025Jun 9, 2025
mlip
Public
Library for efficient training and application of Machine Learning Interatomic Potentials (MLIP)
Python
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Apache License 2.0
•1•35•0•0•Updated Jun 6, 2025Jun 6, 2025
Mava
Public
🦁 A research-friendly codebase for fast experimentation of multi-agent reinforcement learning in JAX
research reinforcement-learning multiagent multi-agent-systems jax multi-agent-reinforcement-learning marl
Python
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Apache License 2.0
•105•800•22•4•Updated Jun 6, 2025Jun 6, 2025
protein-structure-tokenizer
Public
Official implementation of "Learning the language of protein structures"
Python
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Apache License 2.0
•2•32•2•1•Updated Jun 5, 2025Jun 5, 2025
AbBFN2
Public
AbBFN2: A flexible antibody foundation model based on Bayesian Flow Networks
Python
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Apache License 2.0
•5•18•0•0•Updated Jun 4, 2025Jun 4, 2025
MMseqs2-App
Public
MMseqs2 app to run on your workstation or servers
Vue
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GNU General Public License v3.0
•27•0•0•0•Updated Jun 3, 2025Jun 3, 2025
aichor-demo
Public
Collection of smoke test with any operator, for AIchor platform
Python
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MIT License
•34•1•0•3•Updated May 26, 2025May 26, 2025
aichor-demo-private
Public
Collection of smoke test with any operator, for AIchor platform
Python
•34•0•0•0•Updated May 22, 2025May 22, 2025
og-marl
Public
Datasets with baselines for offline multi-agent reinforcement learning.
reinforcement-learning multi-agent-reinforcement-learning offline-reinforcement-learning
Python
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Apache License 2.0
•14•170•2•0•Updated May 10, 2025May 10, 2025
xla
Public
A machine learning compiler for GPUs, CPUs, and ML accelerators
C++
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Apache License 2.0
•574•0•0•0•Updated Apr 30, 2025Apr 30, 2025
jax
Public
Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more
Python
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Apache License 2.0
•3.1k•0•0•0•Updated Apr 29, 2025Apr 29, 2025
tcr-dataset-size-estimation
Public
Jupyter Notebook
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GNU General Public License v3.0
•0•0•0•0•Updated Apr 17, 2025Apr 17, 2025
aichor-demo-kubecon25
Public
Collection of smoke test with any operator, for AIchor platform
Python
•34•0•0•0•Updated Mar 31, 2025Mar 31, 2025
aichor-azure-demo
Public
Collection of smoke test with any operator, for AIchor platform
Python
•34•0•0•0•Updated Mar 28, 2025Mar 28, 2025
flashbax
Public
⚡ Flashbax: Accelerated Replay Buffers in JAX
machine-learning reinforcement-learning hpc buffers rl jax off-policy
Python
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Apache License 2.0
•19•238•6•0•Updated Mar 27, 2025Mar 27, 2025
protein-sequence-bfn
Public
Supporting code for our paper "Protein Sequence Modelling with Bayesian Flow Networks"
protein-sequence bayesian-flow-networks bfns
Python
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Other
•3•44•1•0•Updated Mar 3, 2025Mar 3, 2025
aichor-demo-db
Public
Collection of smoke test with any operator, for AIchor platform
Python
•34•0•0•0•Updated Feb 27, 2025Feb 27, 2025
aichor-demo-db-tests
Public
Collection of smoke test with any operator, for AIchor platform
Python
•34•0•0•0•Updated Feb 27, 2025Feb 27, 2025
aichor-demo-scc
Public
Collection of smoke test with any operator, for AIchor platform
Python
•34•0•0•0•Updated Feb 26, 2025Feb 26, 2025
InstaGeo-E2E-Geospatial-ML
Public
A python package for end-to-end geospatial machine learning using multispectral earth observation data such as NASA HLS and ESA Sentinel-2.
deep-learning geospatial remote-sensing
Python
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Other
•21•25•4•1•Updated Feb 21, 2025Feb 21, 2025
SKAInnotate
Public
Python
•1•1•1•0•Updated Feb 20, 2025Feb 20, 2025
metalic
Public
Meta in-context learning for protein fitness prediction
Python
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Apache License 2.0
•3•11•1•1•Updated Feb 7, 2025Feb 7, 2025
aichor-demo-dell
Public
Collection of smoke test with any operator, for AIchor platform
Python
•34•0•0•0•Updated Jan 21, 2025Jan 21, 2025
marl-eval
Public
A tool for aggregating and plotting MARL experiment data.
experiment benchmarking research reinforcement-learning evaluation multi-agent-systems multi-agent-reinforcement-learning marl
Python
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Apache License 2.0
•7•77•4•2•Updated Jan 20, 2025Jan 20, 2025
matrax
Public
A collection of matrix games in JAX
jax matrix-game multi-agent-reinforcement-learning
Python
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Apache License 2.0
•3•11•0•0•Updated Nov 28, 2024Nov 28, 2024
memento
Public
Official Implementation of Memento
Python
•1•18•0•1•Updated Nov 19, 2024Nov 19, 2024
openfold-internal
Public
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
Python
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Apache License 2.0
•603•0•0•1•Updated Oct 23, 2024Oct 23, 2024