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    • MACS

      Public
      MACS -- Model-based Analysis of ChIP-Seq
      Python
      BSD 3-Clause "New" or "Revised" License
      2737752620Updated May 6, 2026May 6, 2026
    • Pipeline codes for analyzing various genomics datasets based on MACS3
      Python
      BSD 3-Clause "New" or "Revised" License
      9800Updated Aug 5, 2025Aug 5, 2025
    • MACSr

      Public
      MACS3 R/BioC wrapper
      R
      BSD 3-Clause "New" or "Revised" License
      5800Updated Sep 20, 2024Sep 20, 2024
    • HMMRATAC

      Public
      HMMRATAC peak caller for ATAC-seq data
      Java
      GNU General Public License v3.0
      21000Updated Mar 7, 2022Mar 7, 2022
    • MAESTRO

      Public
      Single-cell Transcriptome and Regulome Analysis Pipeline
      C
      GNU General Public License v3.0
      79400Updated Mar 2, 2022Mar 2, 2022
    • chromap

      Public
      Fast alignment and preprocessing of chromatin profiles
      C++
      MIT License
      29000Updated Feb 23, 2022Feb 23, 2022
    • MACSdata

      Public
      R
      BSD 3-Clause "New" or "Revised" License
      2000Updated Dec 8, 2020Dec 8, 2020
    • Website of MACS3
      Creative Commons Zero v1.0 Universal
      0010Updated Jun 3, 2020Jun 3, 2020
    • Documentations of MACS3
      Creative Commons Zero v1.0 Universal
      0000Updated Jun 3, 2020Jun 3, 2020
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