Mazurowski Lab

All

39 repositories

ContourDiff
Public
Contour-Guided Diffusion Models for Unpaired Image-to-Image Translation
Python
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Apache License 2.0
•10•61•0•0•Updated Dec 8, 2025Dec 8, 2025
SAMFailureMetrics
Public
[WACV 2026] Metrics for tree-likeness and textural contrast of objects for segmentation and other computer vision tasks.
segment-anything wacv2026
Python
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Apache License 2.0
•0•8•0•0•Updated Nov 17, 2025Nov 17, 2025
GuidedMorph
Public
Python
•2•7•1•0•Updated Nov 13, 2025Nov 13, 2025
SLM-SAM2
Public
This is the official implementation of SLM-SAM 2
Python
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GNU General Public License v3.0
•6•22•0•0•Updated Oct 29, 2025Oct 29, 2025
PulmonaryEmbolismSegmentation
Public
Software asset for "Rethinking Pulmonary Embolism Segmentation: A Study of Current Approaches and Challenges with an Open Weight Model"
Shell
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Other
•0•5•0•0•Updated Oct 6, 2025Oct 6, 2025
mri_foundation
Public
Python
•10•74•3•0•Updated Sep 16, 2025Sep 16, 2025
SlicerSegmentHumanBody
Public
3D Slicer extension for SegmentAnyBone developed by Mazurowski Lab
segmentation 3d-slicer 3d-slicer-extension medical-image-segmentation segment-anything-model
Python
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Other
•5•14•0•0•Updated Aug 23, 2025Aug 23, 2025
Foundation-based-reg
Public
This is an official repo for the paper of "Are Vision Foundation Models Ready for Out-of-the-Box Medical Image Registration?"
Python
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Apache License 2.0
•11•35•2•0•Updated Aug 14, 2025Aug 14, 2025
CT-Muscle-and-Fat-Segmentation
Public
Python
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Other
•8•38•0•0•Updated Aug 7, 2025Aug 7, 2025
BreastSegNet
Public
0•1•0•0•Updated Jul 24, 2025Jul 24, 2025
BreastMRI_density
Public
Jupyter Notebook
•1•1•0•0•Updated Jul 16, 2025Jul 16, 2025
segmentation-guided-diffusion
Public
[MICCAI 2024] Easy diffusion models (optionally with segmentation guidance) for medical images and beyond.
diffusion-models ddpm semantic-synthesis diffusers conditional-diffusion miccai2024
Python
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Other
•20•210•7•0•Updated Jun 18, 2025Jun 18, 2025
SegmentAnyMuscle
Public
Python
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Other
•4•30•0•0•Updated Jun 7, 2025Jun 7, 2025
SlicerSegmentWithSAM
Public
3D Slicer extension for Segment Anything Model (SAM) developed by Meta
segmentation 3d-slicer 3d-slicer-extension medical-image-segmentation segment-anything-model
Python
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Apache License 2.0
•7•70•7•1•Updated Jun 2, 2025Jun 2, 2025
medical-image-similarity-metrics
Public
An evaluation framework for image generation metrics.
medical-imaging gan distance-measures generative-ai
Jupyter Notebook
•1•7•0•0•Updated May 23, 2025May 23, 2025
RaD
Public
RaD: a metric for comparing medical image distributions.
computer-vision medical-imaging medical-image-analysis fid
Python
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Apache License 2.0
•0•4•0•0•Updated May 13, 2025May 13, 2025
intrinsic-properties
Public
[ICLR 2024] Easy tools for measuring the label sharpness and intrinsic dimension of datasets and learned representations, which relate to model generalization a…
pytorch generalization medical-image-analysis intrinsic-dimension label-sharpness
Python
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Apache License 2.0
•3•17•0•0•Updated Mar 12, 2025Mar 12, 2025
Scoliosis_project
Public
This is an official repo for the paper of automatic scoliosis angle measurement.
Jupyter Notebook
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Apache License 2.0
•1•3•1•0•Updated Mar 1, 2025Mar 1, 2025
SegmentAnyBone
Public
SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI
deep-learning medical-imaging segmentation bone-segmentation segment-anything-model
Python
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Other
•22•117•12•0•Updated Dec 23, 2024Dec 23, 2024
finetune-SAM
Public
This is an official repo for fine-tuning SAM to customized medical images.
sam medical-imaging finetune foundation-models
Python
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Apache License 2.0
•42•275•10•0•Updated Oct 18, 2024Oct 18, 2024
segment-anything2-medical-evaluation
Public
Python
•3•11•2•0•Updated Aug 26, 2024Aug 26, 2024
MRI-parameter-prediction
Public
(MIDL 2023) Code for "Reverse Engineering Breast MRIs: Predicting Acquisition Parameters Directly from Images"
deep-learning pytorch mri classification breast-cancer medical-image-analysis cancer-classification breast-mri
Python
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Apache License 2.0
•0•6•0•0•Updated Jun 27, 2024Jun 27, 2024
radiologyintrinsicmanifolds
Public
(MICCAI 2022) Code for "The Intrinsic Manifolds of Radiological Images and their Role in Deep Learning" (intrinsic dimensions)
deep-learning radiology medical-image-processing medical-image-analysis intrinsic-dimension
Jupyter Notebook
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Apache License 2.0
•0•8•0•0•Updated Jun 27, 2024Jun 27, 2024
segment-anything-medical-evaluation
Public
Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis
medical-imaging segmentation medical-image-analysis segment-anything segment-anything-model
Python
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Apache License 2.0
•18•170•0•0•Updated Jun 13, 2024Jun 13, 2024
picard-anomalydetection
Public
Pluralistic Image Completion for Anomaly Detection (Med. Image Anal. 2023)
breast-cancer-prediction inpainting anomaly-detection image-completion medical-image-analysis
Python
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Apache License 2.0
•1•7•0•0•Updated Jun 13, 2024Jun 13, 2024
SlicerExtensionsIndex
Public
Slicer extensions index
Python
•286•0•0•0•Updated May 9, 2024May 9, 2024
single-image-test-time-adaptation
Public
Single-image test-time domain adaptation for segmentation models.
segmentation domain-adaptation test-time-adaptation
Python
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Apache License 2.0
•2•26•0•0•Updated Apr 16, 2024Apr 16, 2024
3D-Breast-FGT-and-Blood-Vessel-Segmentation
Public
Python
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Other
•16•32•5•0•Updated Apr 2, 2024Apr 2, 2024
swssl-for-anomaly-detection
Public
SWSSL - Sliding window-based self-supervised learning for anomaly detection in high-resolution images (IEEE Trans. on Medical Imaging 2023)
anomaly-detection breast-cancer-classification
Python
•1•7•0•0•Updated Mar 12, 2024Mar 12, 2024
ExtensionsIndexStable
Public
Slicer extensions index
Python
•286•0•0•0•Updated Jan 31, 2024Jan 31, 2024