Repositories list

• auvstatus

  Public
  LRAUV status widgets

  Python

  •1•3•48•0•Updated Dec 16, 2025Dec 16, 2025

• vars-annotation

  Public

  mbari-org/vars-annotation’s past year of commit activity
  Video Annotation Application for MBARI's Media Management (M3) software stack

  Java

  •

  Apache License 2.0

  •6•18•18•0•Updated Dec 16, 2025Dec 16, 2025

• oni

  Public
  Organism Naming Infrastructure

  TSQL

  •0•1•1•0•Updated Dec 16, 2025Dec 16, 2025

• auv-python

  Public
  Python code for processing MBARI AUV instrument data

  Jupyter Notebook

  •

  BSD 3-Clause "New" or "Revised" License

  •2•3•0•0•Updated Dec 16, 2025Dec 16, 2025

• kb

  Public

  mbari-org/kb’s past year of commit activity
  Development repo for the VARS KB web app

  JavaScript

  •0•1•1•0•Updated Dec 16, 2025Dec 16, 2025

• sdcat

  Public
  Sliced Detection and Clustering Analysis Toolkit - a tool to quickly find and cluster salient objects in your images for accelerated labeling

  uavdroneclustering+ 9object-detectionplanktonsahisaliency-detectiondeepseayolov5hdbscan-clustering-algorithm+ 2

  Python

  •0•9•1•0•Updated Dec 14, 2025Dec 14, 2025

• aidata

  Public
  Extract, transform, and load/download and augment images and annotations for detection, clustering or classification workflows

  machine-learningdatabaseai+ 1etl

  Python

  •2•5•1•0•Updated Dec 14, 2025Dec 14, 2025

• vitstrain

  Public
  Fine-tune vision transformer models to classify Plankton, UAV(drone), midwater and benthic images.

  transformerspytorch

  Python

  •0•4•2•0•Updated Dec 13, 2025Dec 13, 2025

• fastapi-tator

  Public
  RESTful API for bulk operations on a Tator annotation database on clustered, labeled, localization data. It uses the Python web framework FastAPI.

  annotation-processingfastapitator

  Python

  •

  Apache License 2.0

  •0•1•0•0•Updated Dec 11, 2025Dec 11, 2025

• dash5

  Public
  Web based UI and client applications for MBARI.

  TypeScript

  •2•1•49•0•Updated Dec 11, 2025Dec 11, 2025

• m3-quickstart

  Public
  A simple and quick method to run MBARI's Video Annotation and References System

  Python

  •1•2•9•0•Updated Dec 9, 2025Dec 9, 2025

• aipipeline

  Public
  Library for running detection, clustering or classification ai pipelines using ApacheBeam

  image-classificationapache-beamobject-detection+ 3object-trackingvideo-processing-pipelineimage-processing-pipeline

  Jupyter Notebook

  •

  Apache License 2.0

  •0•4•1•0•Updated Dec 7, 2025Dec 7, 2025

• vars-legacy-migrator

  Public
  Tools for migrating legacy VARS databases to current versions

  Scala

  •0•0•0•0•Updated Dec 1, 2025Dec 1, 2025

• tator

  Public
  Video analytics web platform revised for MBARI use

  image-annotationvideo-annotation

  JavaScript

  •

  GNU Affero General Public License v3.0

  •30•0•0•0•Updated Nov 22, 2025Nov 22, 2025

• svt_transcoder

  Public
  Dockerfile

  •

  MIT License

  •0•0•0•0•Updated Nov 22, 2025Nov 22, 2025

• tator-transcode

  Public
  Python

  •0•0•0•0•Updated Nov 22, 2025Nov 22, 2025

• lcm-websocket-server

  Public
  WebSocket server for republishing LCM messages.

  middlewarewebsocketlcm

  Python

  •0•4•5•1•Updated Nov 21, 2025Nov 21, 2025

• TheNextWave

  Public
  Deterministic ocean wave prediction from sparse buoy data

  MATLAB

  •

  Creative Commons Zero v1.0 Universal

  •1•1•0•0•Updated Nov 21, 2025Nov 21, 2025

• vars-gridview

  Public
  VARS GridView is a tool for reviewing and correcting VARS localizations in bulk.

  Python

  •

  MIT License

  •0•3•18•0•Updated Nov 20, 2025Nov 20, 2025

• SeafloorMappingDB

  Public
  Make MBARI seafloor mapping datasets more accessible and useful

  Python

  •

  GNU General Public License v3.0

  •6•4•24•0•Updated Nov 18, 2025Nov 18, 2025

• pbp

  Public
  Process ocean audio data archives to daily analysis products of hybrid millidecade spectra using PyPAM.

  dockercloudnotebook+ 4soundscapeaudio-processinghybrid-millidecade-bandspypam

  Python

  •

  Apache License 2.0

  •6•16•20•3•Updated Nov 15, 2025Nov 15, 2025

• rf-detrtrain

  Public
  Fine-tune the SOTA RF-DETR model in AWS SageMaker or locally

  object-detectionrf-detr

  Python

  •

  Apache License 2.0

  •0•2•1•0•Updated Nov 14, 2025Nov 14, 2025

• vampire-squid-java-sdk

  Public
  Java

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 14, 2025Nov 14, 2025

• vampire-squid

  Public
  A video asset manager for tracking videos and camera deployments (e.g. ROV dives, AUV deployments)

  Scala

  •

  Apache License 2.0

  •1•6•0•0•Updated Nov 13, 2025Nov 13, 2025

• KelpCoverage

  Public
  calculating kelp coverage from UAV imagery

  Python

  •

  MIT License

  •0•2•0•0•Updated Nov 12, 2025Nov 12, 2025

• pbp-jupyter

  Public
  Creating and using a Jupyter environment with the mbari-pbp package already installed

  Just

  •

  Apache License 2.0

  •0•1•0•0•Updated Oct 26, 2025Oct 26, 2025

• benchmark_eval

  Public
  Jupyter Notebook

  •

  MIT License

  •0•3•0•0•Updated Oct 23, 2025Oct 23, 2025

• annosaurus

  Public
  Service for storing and retrieving video/image annotations from VARS

  Scala

  •

  Apache License 2.0

  •1•2•3•0•Updated Oct 20, 2025Oct 20, 2025

• expd-java

  Public
  Java libraries for accessing MBARI's expedition data

  Java

  •

  Apache License 2.0

  •0•0•0•0•Updated Oct 15, 2025Oct 15, 2025

• raziel

  Public
  A centralized configuration server for MBARI's Video Annotation and Reference System (VARS)

  Scala

  •

  Apache License 2.0

  •0•0•0•0•Updated Oct 13, 2025Oct 13, 2025