Repositories list

• srkw-status

  Public
  Repo for archiving code related to SRKW population projections, etc

  esar-packagemarine-mammals+ 4status-reviewnwfsc-cbsrkwkiller-whale

  R

  •

  GNU General Public License v3.0

  •0•3•0•0•Updated Feb 3, 2026Feb 3, 2026

• FishSET

  Public
  FishSET (fisheries spatial economics toolbox) includes tools for spatial data analysis, running location choice models, and simulating policy scenarios.

  economicsr-packagelocation-choice-model+ 1nwfsc-fram

  R

  •

  Other

  •4•7•109•2•Updated Feb 2, 2026Feb 2, 2026

• Skagit-IBM

  Public
  C++

  •

  Other

  •0•0•0•0•Updated Jan 31, 2026Jan 31, 2026

• SMORES

  Public
  Repository to house the materials to develop the Suitability Modeling for Offshore Resources and Energy Siting (SMORES) Shiny Application.

  R

  •

  Apache License 2.0

  •0•0•4•0•Updated Jan 29, 2026Jan 29, 2026

• fisheye_purcprod

  Public
  R

  •

  Other

  •0•0•0•0•Updated Jan 21, 2026Jan 21, 2026

• VMS-pipeline

  Public
  This repo matches VMS location data with fishticket information to help identify fishing locations.

  vmsfisheries-footprints

  R

  •

  Other

  •0•2•18•0•Updated Jan 15, 2026Jan 15, 2026

• EulachonRADseq

  Public
  Eulachon RAD-seq - multi-year analysis of Eulachon populations in British Columbia, Washington, Oregon, and California (PNW)

  nwfsc-cb-genetics

  HTML

  •

  Apache License 2.0

  •0•1•1•0•Updated Jan 13, 2026Jan 13, 2026

• fisheye_perfmets

  Public
  HTML

  •0•0•0•0•Updated Dec 17, 2025Dec 17, 2025

• vermilion-sunset-gtseq

  Public
  Species ID project on Vermilion/Sunset Rockfish - 2004-2024

  nwfsc-cb-genetics

  R

  •

  Apache License 2.0

  •1•0•0•0•Updated Dec 4, 2025Dec 4, 2025

• CMISST

  Public
  Covariance Map Index of Sea Surface Temperature

  R

  •

  Apache License 2.0

  •0•1•0•0•Updated Nov 13, 2025Nov 13, 2025

• eulachonGSI

  Public
  to hold code associated with eulachon GSI project

  nwfsc-cb-genetics

  R

  •

  Apache License 2.0

  •2•1•0•0•Updated Oct 10, 2025Oct 10, 2025

• fisheye_all

  Public
  SCSS

  •0•0•0•0•Updated Sep 5, 2025Sep 5, 2025

• Salmon_trends_2025

  Public
  Data code used for Ford et al. 2025 Abundance trends of Pacific salmon during a quarter century of ESA protection

  R

  •0•0•0•0•Updated Aug 24, 2025Aug 24, 2025

• fisheye_whiting

  Public
  Fisheye Whiting App

  HTML

  •0•0•0•0•Updated Aug 20, 2025Aug 20, 2025

• Wenatchee-RRS

  Public
  Code and results for Wenatchee River spring Chinook relatively reproductive success project

  nwfsc-cb-genetics

  HTML

  •

  Apache License 2.0

  •0•0•0•0•Updated Aug 13, 2025Aug 13, 2025

• spatial-age-models

  Public
  R

  •

  GNU General Public License v3.0

  •1•1•2•0•Updated Jul 14, 2025Jul 14, 2025

• microhaplotyping_speciesID

  Public
  Repo for rockfish species ID work using genetics

  nwfsc-cb-genetics

  HTML

  •

  Apache License 2.0

  •1•0•0•0•Updated Jul 7, 2025Jul 7, 2025

• hood-canal-steelhead-redds

  Public
  Analysis of Hood Canal steelhead supplementation experiment

  R

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jul 7, 2025Jul 7, 2025

• vermilion_sunset_epigenetics

  Public
  Working repository for analysis of epigenetic data from Vermilion and Sunset rockfish

  nwfsc-cb-genetics

  R

  •

  Apache License 2.0

  •2•0•0•0•Updated Jun 27, 2025Jun 27, 2025

• CB_Genetics_Landing_Page

  Public
  Landing page for the Conservation Biology Molecular Genetics team. Links to repos for CB Genetics projects and other resources.

  nwfsc-cb-genetics

  Lua

  •

  Creative Commons Zero v1.0 Universal

  •0•3•0•0•Updated May 2, 2025May 2, 2025

• Streamflow-Means-NWM

  Public
  Repo to describe creating a package of processed streamflow means for Morgan Bond

  Jupyter Notebook

  •2•0•0•1•Updated Apr 2, 2025Apr 2, 2025

• nws-data-processing

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Mar 28, 2025Mar 28, 2025

• zoid

  Public
  Trinomial mixture models in Stan, for fitting to compositional data with 0s

  cranstanr-package+ 2mixture-modelsnwfsc-cb

  C++

  •

  Other

  •3•9•1•0•Updated Mar 17, 2025Mar 17, 2025

• noaa-nwfsc.github.io

  Public template
  Landing page for the noaa-nwfsc GitHub Enterprise Cloud

  CSS

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Mar 5, 2025Mar 5, 2025

• test-repo

  Public
  0•0•0•0•Updated Mar 4, 2025Mar 4, 2025

• NOAA-Omics-pubs

  Public
  NOAA Omics publication plotting

  R

  •

  Creative Commons Zero v1.0 Universal

  •0•1•0•0•Updated Mar 3, 2025Mar 3, 2025

• VRAP

  Public
  R package for the VRAP program

  r-packagesalmonprotected-species

  R

  •0•0•0•0•Updated Nov 23, 2024Nov 23, 2024

• satf

  Public
  R package that contains general tables and figures such as diagnostics plots, standard objects in an assessment report, and other important visualizations to in…

  r-package

  R

  •

  Other

  •6•0•0•0•Updated Nov 14, 2024Nov 14, 2024

• NWFSC-PAM-Lab-Manual

  Public
  Lab Manual for NWFSC Marine Mammal Passive Acoustic Monitoring

  JavaScript

  •

  Creative Commons Zero v1.0 Universal

  •0•0•3•0•Updated Oct 23, 2024Oct 23, 2024

• FY24-HPCC-Incubator-testing-for-bioinformatics

  Public
  FY24 HPCC Incubator funded project for bioinformatics in the cloud

  geneticsnwfsc-cb

  HCL

  •

  Other

  •0•1•1•0•Updated Sep 13, 2024Sep 13, 2024