Repositories list

• hic_sm

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Mar 10, 2026Mar 10, 2026

• precellar

  Public
  Universal Single-Cell Genomics Preprocessing package

  Rust

  •3•49•2•2•Updated Feb 21, 2026Feb 21, 2026

• anndata-rs

  Public
  Rust

  •11•42•10•2•Updated Feb 12, 2026Feb 12, 2026

• launch-code-server

  Public
  Python

  •1•0•0•0•Updated Jan 26, 2026Jan 26, 2026

• RNA-sm

  Public
  RNA-seq snakemake pipeline

  Python

  •

  MIT License

  •0•0•0•0•Updated Jan 25, 2026Jan 25, 2026

• ATAC-sm

  Public
  Snakemake pipeline for ATAC-seq

  Python

  •

  MIT License

  •0•0•0•0•Updated Jan 5, 2026Jan 5, 2026

• bwa-mem2-rust

  Public
  Rust

  •3•3•0•1•Updated Jan 4, 2026Jan 4, 2026

• cuttag_sm

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Jan 3, 2026Jan 3, 2026

• regulatory-genomics.github.io

  Public
  HTML

  •

  BSD 3-Clause "New" or "Revised" License

  •0•0•0•0•Updated Nov 17, 2025Nov 17, 2025

• star-aligner

  Public
  C

  •2•1•0•1•Updated Oct 2, 2025Oct 2, 2025

• genomics-dataloader

  Public
  Utilities for loading genomics data in PyTorch

  Rust

  •1•6•0•0•Updated Sep 6, 2025Sep 6, 2025

• regbench_data

  Public
  Python

  •0•2•0•0•Updated Sep 5, 2025Sep 5, 2025

• genomics-model-zoo

  Public
  A collection of pre-trained genomics models

  Python

  •0•1•0•0•Updated Aug 24, 2025Aug 24, 2025

• file-download

  Public
  Rust

  •0•0•0•0•Updated Jul 2, 2025Jul 2, 2025

• sc-bench

  Public
  Rust

  •

  MIT License

  •0•0•0•0•Updated Jan 15, 2025Jan 15, 2025

• bwa-rust

  Public
  Rust

  •1•2•3•0•Updated Sep 13, 2024Sep 13, 2024

• pandoc-crossref

  Public
  Pandoc filter for cross-references

  Haskell

  •

  GNU General Public License v2.0

  •78•0•0•0•Updated Sep 24, 2023Sep 24, 2023