Skip to content

@seanome Seanome

Change the repository type filter

All

    Repositories list

    11 repositories

    • kmerseek

      Public
      Efficient protein domain annotation search with reduced amino acid k-mers
      Rust
      •
      MIT License
      •3•9•15•5•Updated Jul 24, 2026Jul 24, 2026

    • 2024-kmerseek-analysis

      Public
      Analysis Scripts for Kmerseek protein search
      Jupyter Notebook
      •
      MIT License
      •1•1•4•6•Updated Jun 16, 2026Jun 16, 2026

    • GeneForge

      Public
      A Nextflow Pipeline for Gene Prediction and Functional Annotation
      Nextflow
      •
      MIT License
      •1•0•0•0•Updated Apr 14, 2026Apr 14, 2026

    • 2025-longevity-x-ai-hackathon

      Public
      Base repo for code to clean and upload datasets for Longevity x AI Hackathon June 14-15, 2025 https://lu.ma/a2ag12ya
      Jupyter Notebook
      •
      MIT License
      •2•2•1•0•Updated Nov 9, 2025Nov 9, 2025

    • seanome.org

      Public
      Code for Seanome.org website
      HTML
      •
      MIT License
      •0•1•1•1•Updated Aug 17, 2025Aug 17, 2025

    • nf-kmerseekanalysis

      Public
      Nextflow pipeline to process csv output from Kmerseek/Sourmash for benchmarking
      Nextflow
      •
      MIT License
      •1•0•1•0•Updated May 22, 2025May 22, 2025

    • 2025-biodata-wealth-inequality

      Public
      Code to create figures showing wealth inequality of biological sequence data in the Protein Data Bank (PDB), UniProtKB/SwissProt, UniProtKB/TREMBL (AlphaFoldDB)…
      Jupyter Notebook
      •
      MIT License
      •0•0•3•0•Updated Mar 13, 2025Mar 13, 2025

    • nf-core-kmerseek

      Public
      Nextflow
      •
      MIT License
      •3•5•4•1•Updated Mar 6, 2025Mar 6, 2025

    • 2025-kmerseek-yc-demo

      Public
      Kmerseek demo example for YC S25 Application
      Makefile
      •
      MIT License
      •0•0•0•0•Updated Mar 6, 2025Mar 6, 2025

    • sourmash_plugin_branchwater

      Public
      fast, multithreaded sourmash operations: search, compare, and gather.
      Python
      •
      GNU Affero General Public License v3.0
      •5•0•0•0•Updated Oct 29, 2024Oct 29, 2024

    • 2024-sourmash-branchwater-tf-idf

      Public
      Exploring term frequency, inverse document frequency calculation for Sourmash branchwater k-mer searches
      Jupyter Notebook
      •
      MIT License
      •0•0•1•0•Updated Oct 25, 2024Oct 25, 2024
    ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.