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@seek4science FAIRDOM-SEEK

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    20 repositories

    • seek

      Public template
      For finding, sharing and exchanging Data, Models, Simulations and Processes in Science.
      sciencedatasynthetic-biologyopendatasystems-biologysemantic-webisapublicationfairdatamanagement
      Ruby
      •
      BSD 3-Clause "New" or "Revised" License
      •59•91•437•14•Updated Mar 3, 2026Mar 3, 2026

    • seek-documentation

      Public
      Documentation for the FAIRDOM-SEEK platform, a web-based resource for sharing heterogeneous scientific research datasets, models or simulations, processes and r…
      HTML
      •
      BSD 3-Clause "New" or "Revised" License
      •2•0•17•0•Updated Feb 9, 2026Feb 9, 2026

    • tutorials

      Public
      TeX
      •0•0•0•0•Updated Feb 7, 2026Feb 7, 2026

    • seek4science.github.io

      Public
      Product website for the FAIRDOM-SEEK platform
      JavaScript
      •3•0•1•0•Updated Oct 15, 2025Oct 15, 2025

    • workflow-test-fixture

      Public
      A workflow and associated files for use in SEEK's tests
      MIT License
      •0•0•0•0•Updated Apr 16, 2025Apr 16, 2025

    • sample-template-generator

      Public
      Java
      •
      Other
      •0•0•0•1•Updated Apr 10, 2025Apr 10, 2025

    • simple-spreadsheet-extractor-gem

      Public
      Wraps a simple java utility to extracts contents of a spreadsheet as simple XML
      Ruby
      •
      BSD 3-Clause "New" or "Revised" License
      •5•7•0•0•Updated Jan 7, 2025Jan 7, 2025

    • DOI-query-tool

      Public
      Parser for doi urls
      Ruby
      •
      MIT License
      •5•0•0•3•Updated May 16, 2024May 16, 2024

    • sample-template-generator-gem

      Public
      Ruby
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Feb 1, 2024Feb 1, 2024

    • simple-spreadsheet-extractor

      Public
      Simply reads a XLS or XLSX spreadsheet document, and creates an XML or CVS representation of its contents
      Java
      •
      BSD 3-Clause "New" or "Revised" License
      •7•2•0•0•Updated Feb 1, 2024Feb 1, 2024

    • openseek-api-gem

      Public
      ruby gem to talk to openbis-api
      Ruby
      •
      BSD 3-Clause "New" or "Revised" License
      •2•0•0•0•Updated May 24, 2023May 24, 2023

    • openseek-api

      Public
      An interface to work with OpenBis
      Java
      •
      BSD 2-Clause "Simplified" License
      •2•0•0•0•Updated May 24, 2023May 24, 2023

    • bives

      Public
      Ruby
      •
      Apache License 2.0
      •0•0•0•0•Updated May 23, 2023May 23, 2023

    • stress-testing

      Public
      Code used to stress test SEEK, along with stress testing results
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Apr 26, 2022Apr 26, 2022

    • zenodo-client

      Public
      A client to interact with Zenodo's REST API
      Ruby
      •
      Other
      •0•0•0•0•Updated Jan 6, 2021Jan 6, 2021

    • seekAPIexamples

      Public
      Examples of how to use the SEEK API
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •4•0•0•0•Updated Nov 21, 2019Nov 21, 2019

    • ibisba-hub

      Public
      A general place for the hub
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Dec 6, 2018Dec 6, 2018

    • fairdomhub-test

      Public
      selenium script for testing seek
      Ruby
      •0•0•0•0•Updated Jul 27, 2017Jul 27, 2017

    • fairdom-website-test

      Public
      Ruby
      •0•0•0•0•Updated Feb 1, 2016Feb 1, 2016

    • biostar-central

      Public
      Biostar Q&A
      Python
      •
      Other
      •231•0•0•0•Updated Oct 9, 2015Oct 9, 2015