Repositories list

• wave

  Public
  On-demand containers provisioning service

  dockerkubernetesnextflow+ 2

  dockerkubernetesnextflowcontainerssingularity

  Groovy

  •

  GNU Affero General Public License v3.0

  •1313 forks•5757 stars•4545 issues•2828 pull requests•Updated Jul 11, 2026Jul 11, 2026

• libseqera

  Public
  Library for Java & Groovy modules shared across Seqera projects

  Groovy

  •

  Apache License 2.0

  •33 forks•44 stars•11 issue•55 pull requests•Updated Jul 11, 2026Jul 11, 2026

• nf-metro

  Public
  Metro-map-style SVG diagrams from Mermaid graph definitions, designed for visualizing bioinformatics pipeline workflows

  Python

  •

  MIT License

  •22 forks•1111 stars•5858 issues•88 pull requests•Updated Jul 11, 2026Jul 11, 2026

• nf-jdk

  Public
  Seqera JDK base image

  Shell

  •00 forks•00 stars•44 issues•11 pull request•Updated Jul 11, 2026Jul 11, 2026

• helm-charts

  Public
  Go Template

  •

  Apache License 2.0

  •00 forks•11 star•22 issues•22 pull requests•Updated Jul 11, 2026Jul 11, 2026

• docs

  Public
  Source code for the Seqera documentation portal.

  MDX

  •77 forks•33 stars•2222 issues•3737 pull requests•Updated Jul 11, 2026Jul 11, 2026

• tower-cli

  Public
  Nextflow Tower CLI tool

  Java

  •

  Apache License 2.0

  •1111 forks•5555 stars•8080 issues•66 pull requests•Updated Jul 10, 2026Jul 10, 2026

• nf-aggregate

  Public
  Pipeline to aggregate pertinent metrics across pipeline runs on the Seqera Platform

  workflowpipelinenextflow+ 2

  workflowpipelinenextflowqcseqera

  Python

  •

  MIT License

  •1010 forks•88 stars•11 issue•11 pull request•Updated Jul 10, 2026Jul 10, 2026

• nf-raffle

  Public
  This repository contains code for the nf-raffle pipeline by Seqera, used to conduct raffles at events.

  HTML

  •33 forks•11 star•22 issues•00 pull requests•Updated Jul 9, 2026Jul 9, 2026

• terraform-provider-seqera

  Public
  Go

  •

  Apache License 2.0

  •33 forks•66 stars•77 issues•11 pull request•Updated Jul 9, 2026Jul 9, 2026

• wave-cli

  Public
  Command line tool for Wave containers provisioning service

  dockerkubernetescontainers+ 3

  dockerkubernetescontainerscondasingularityspack

  Java

  •

  Apache License 2.0

  •44 forks•1919 stars•77 issues•11 pull request•Updated Jul 8, 2026Jul 8, 2026

• tower-agent

  Public
  Agent app that allows connecting remote batch schedulers to Seqera Platform

  nextflow

  nextflow

  Java

  •

  Apache License 2.0

  •66 forks•1111 stars•1111 issues•11 pull request•Updated Jul 8, 2026Jul 8, 2026

• staticreg

  Public
  A frontend application to navigate OCI registries

  registryociregistry-ui

  registryociregistry-ui

  Go

  •

  Apache License 2.0

  •00 forks•55 stars•1111 issues•33 pull requests•Updated Jul 8, 2026Jul 8, 2026

• cx-field-tools-installer

  Public
  Unofficial Terraform solution to help clients install Seqera Platform

  Python

  •

  Apache License 2.0

  •44 forks•55 stars•105105 issues•1414 pull requests•Updated Jul 7, 2026Jul 7, 2026

• RustQC

  Public
  Fast genomics quality control tools for sequencing data, written in Rust.

  rustbioinformaticsanalysis+ 6

  rustbioinformaticsanalysisspeedrnaseqnf-coreefficienrewrite-it-in-rustrewrites-bio

  Rust

  •

  GNU General Public License v3.0

  •66 forks•115115 stars•55 issues•99 pull requests•Updated Jul 7, 2026Jul 7, 2026

• homebrew-tap

  Public
  Homebrew Tap of Seqera products and tools

  Ruby

  •

  Apache License 2.0

  •11 fork•00 stars•11 issue•00 pull requests•Updated Jul 6, 2026Jul 6, 2026

• nf-lint-pre-commit

  Public
  Shell

  •

  MIT License

  •11 fork•44 stars•11 issue•11 pull request•Updated Jul 2, 2026Jul 2, 2026

• nf-canary

  Public
  A minimal Nextflow workflow for testing infrastructure.

  HTML

  •

  MIT License

  •1010 forks•66 stars•55 issues•44 pull requests•Updated Jul 1, 2026Jul 1, 2026

• nf-slack

  Public
  Nextflow plugin for Slack messages

  Groovy

  •

  Apache License 2.0

  •00 forks•33 stars•77 issues•55 pull requests•Updated Jun 30, 2026Jun 30, 2026

• seqera-cli

  Public
  Release repo for the Seqera CLI

  00 forks•11 star•11 issue•00 pull requests•Updated Jun 30, 2026Jun 30, 2026

• migtool

  Public
  No-frills DB migration tool

  Groovy

  •

  Mozilla Public License 2.0

  •11 fork•11 star•55 issues•44 pull requests•Updated Jun 29, 2026Jun 29, 2026

• showcase-automation

  Public
  Python

  •00 forks•00 stars•99 issues•55 pull requests•Updated Jun 27, 2026Jun 27, 2026

• RustQC-benchmarks

  Public
  Benchmark suite for validating RustQC outputs against upstream bioinformatics tools

  Nextflow

  •

  MIT License

  •00 forks•11 star•11 issue•99 pull requests•Updated Jun 24, 2026Jun 24, 2026

• custom-studios-examples

  Public
  This repository contains examples of Dockerfiles for custom Seqera studio applications.

  Dockerfile

  •11 fork•55 stars•11 issue•22 pull requests•Updated Jun 23, 2026Jun 23, 2026

• biofair-euc09-edna-nf

  Public
  BioFAIR EUC-09 — eDNA & metagenomics pipeline: Snakemake source + Nextflow DSL2 port (UK CEH)

  Nextflow

  •00 forks•00 stars•11 issue•00 pull requests•Updated Jun 18, 2026Jun 18, 2026

• studio-r-ide

  Public
  Dockerfile

  •

  Apache License 2.0

  •11 fork•00 stars•11 issue•00 pull requests•Updated Jun 17, 2026Jun 17, 2026

• studio-xpra

  Public
  Dockerfile

  •

  Apache License 2.0

  •11 fork•00 stars•11 issue•00 pull requests•Updated Jun 17, 2026Jun 17, 2026

• studio-jupyter

  Public
  Dockerfile

  •

  Apache License 2.0

  •11 fork•00 stars•11 issue•00 pull requests•Updated Jun 17, 2026Jun 17, 2026

• studio-vscode

  Public
  Dockerfile

  •

  Apache License 2.0

  •11 fork•00 stars•11 issue•00 pull requests•Updated Jun 17, 2026Jun 17, 2026

• rewrites.bio

  Public
  A manifesto for AI-assisted modernisation of bioinformatics software.

  refactoringbioinformaticsai+ 7

  refactoringbioinformaticsaianalysisoptimizationefficiencyspeedrewritesllmrewrite-it-in-rust

  Astro

  •

  MIT License

  •22 forks•5353 stars•44 issues•11 pull request•Updated Jun 16, 2026Jun 16, 2026