Repositories list

• tcia-sdk

  Public
  Java

  •

  Apache License 2.0

  •1•0•0•2•Updated Mar 2, 2026Mar 2, 2026

• eaglescope

  Public
  Hierarchical and Cohort Visualization

  JavaScript

  •

  BSD 3-Clause "New" or "Revised" License

  •18•10•14•2•Updated Dec 18, 2025Dec 18, 2025

• singularity-cli

  Public
  streamlined singularity python client (spython) for singularity

  Python

  •

  Mozilla Public License 2.0

  •31•0•0•0•Updated Feb 12, 2025Feb 12, 2025

• .github

  Public
  Community Support Documents for Sharmalab

  0•0•0•0•Updated Sep 27, 2024Sep 27, 2024

• bindaas

  Public
  Java

  •

  BSD 3-Clause "New" or "Revised" License

  •11•5•2•6•Updated Mar 15, 2024Mar 15, 2024

• escMR

  Public
  A framework and methodology to categorize exam series.

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•1•0•0•Updated Nov 30, 2023Nov 30, 2023

• MEDIator

  Public
  The MEDIator Data Sharing Framework

  data-sharingreplica-setreplicaset-management

  data-sharingreplica-setreplicaset-management

  Java

  •

  Apache License 2.0

  •1•0•0•1•Updated Nov 14, 2023Nov 14, 2023

• Hummingbird

  Public
  A Python-based toolkit for Hybrid AWS Cloud Resource Management, using Boto3

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •0•1•1•0•Updated Aug 3, 2023Aug 3, 2023

• VizRec

  Public
  Deep learning guided visual exploration of data.

  datavizdeep-learning

  datavizdeep-learning

  HTML

  •

  Apache License 2.0

  •3•3•0•8•Updated Dec 10, 2022Dec 10, 2022

• tensorflow-gui

  Public
  GUI for tensorflow

  guidrag-and-droptensorflow+ 1

  guidrag-and-droptensorflowtensorflow-gui

  JavaScript

  •

  BSD 3-Clause "New" or "Revised" License

  •20•35•8•8•Updated Dec 9, 2022Dec 9, 2022

• datacafe

  Public
  A Dynamic Data Warehousing System

  Java

  •

  Apache License 2.0

  •3•5•0•0•Updated Aug 11, 2022Aug 11, 2022

• Datascope

  Public archive
  Interactive linked visual query system for large datasets

  tcia-dacnci-qin

  tcia-dacnci-qin

  JavaScript

  •

  BSD 3-Clause "New" or "Revised" License

  •12•16•15•7•Updated May 25, 2022May 25, 2022

• securitytokenservice

  Public
  Java

  •0•0•1•3•Updated May 20, 2022May 20, 2022

• TCIAPubHubAdmin

  Public archive
  JavaScript

  •2•0•0•5•Updated Apr 29, 2022Apr 29, 2022

• GGOs_COVID-19

  Public
  This repository will be used for the LungCT project.

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •2•1•0•0•Updated Mar 28, 2022Mar 28, 2022

• sharmalab.github.io

  Public
  Landing page for

  CSS

  •6•0•0•0•Updated Feb 25, 2022Feb 25, 2022

• MediCurator

  Public
  Java

  •

  Apache License 2.0

  •0•0•0•0•Updated Apr 16, 2021Apr 16, 2021

• Emory-BMI-GSoC

  Public
  Emory BMI GSoC 2020 Project Ideas

  machine-learningbioinformaticstensorflow+ 4

  machine-learningbioinformaticstensorflowdata-visualizationbiomedical-informaticscancer-imagingbig-data-integration

  Apache License 2.0

  •2•8•0•0•Updated Feb 9, 2021Feb 9, 2021

• Cloudy-Pipelines-Workflows

  Public
  A collection of workflows that have been designed to run against CloudyPipelines and GCP

  WDL

  •2•0•1•1•Updated Mar 25, 2020Mar 25, 2020

• ann-viz

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Feb 26, 2020Feb 26, 2020

• yunpipe

  Public archive
  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Feb 4, 2020Feb 4, 2020

• Emory-BMI-GSoC-2019

  Public
  This is a unified repository for the GSoC 2019 from Biomedical Informatics, Emory University.

  Apache License 2.0

  •6•19•0•0•Updated Dec 16, 2019Dec 16, 2019

• ci4cc-informatics-resources

  Public
  Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are developing.

  MIT License

  •11•0•0•0•Updated Sep 24, 2018Sep 24, 2018

• healthcare

  Public
  Python

  •

  Apache License 2.0

  •174•0•0•0•Updated Sep 20, 2018Sep 20, 2018

• u24_lymphocyte

  Public
  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •20•0•0•0•Updated Sep 8, 2018Sep 8, 2018

• tcia_swagger

  Public
  TCIA Swagger APIs

  1•0•0•0•Updated Sep 4, 2018Sep 4, 2018

• dbmi

  Public archive
  HTML

  •0•0•0•0•Updated Apr 7, 2018Apr 7, 2018

• dc.js

  Public
  Multi-Dimensional charting built to work natively with crossfilter rendered with d3.js

  JavaScript

  •

  Apache License 2.0

  •1.8k•0•0•0•Updated Feb 28, 2018Feb 28, 2018

• TCIAPubHub

  Public archive
  JavaScript

  •1•0•0•0•Updated Jan 22, 2018Jan 22, 2018

• MSCR-BD2K

  Public
  Big Data to Knowledge Course

  2•0•0•0•Updated Nov 4, 2017Nov 4, 2017