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    • Convert an extracted OMOP vocabulary download from OHDSI Athena into a ready-to-query DuckDB file
      Python
      MIT License
      0000Updated Apr 6, 2026Apr 6, 2026
    • Terminology Harmonization using Late-Interaction Reranker With Alignment-tuned Transformers
      Python
      1200Updated Feb 25, 2026Feb 25, 2026
    • High-Performance Engine for Multi-Vector Search
      Rust
      MIT License
      20000Updated Nov 29, 2025Nov 29, 2025
    • Building T2DM patient cohort from data structured in OMOP CDM v5.4
      Jupyter Notebook
      0000Updated Jul 23, 2025Jul 23, 2025
    • Convert the Unified Medical Language System (UMLS) data from RRF files to DuckDB format
      Shell
      Other
      0000Updated Jul 19, 2025Jul 19, 2025
    • Quickstart demo to show how to use SQLMesh to ETL Synthea data to OMOP CDM
      PLpgSQL
      Apache License 2.0
      0000Updated Jul 1, 2025Jul 1, 2025
    • Hades

      Public
      Health Analytics Data-to-Evidence Suite (HADES): A collection of R packages for performing analytics against the Common Data Model.
      R
      Apache License 2.0
      16000Updated Jun 16, 2025Jun 16, 2025
    • omop-book

      Public
      OMOP CDM & OHDSI in Thailand
      TeX
      0401Updated Jun 14, 2025Jun 14, 2025
    • meds_etl

      Public
      A collection of ETLs from common data formats to Medical Event Data Standard
      Python
      Apache License 2.0
      14001Updated Jun 10, 2025Jun 10, 2025
    • Take-home exam for junior Data Engineering candidates.
      Python
      13100Updated Mar 31, 2025Mar 31, 2025
    • A tool to help improve data quality standards in observational data science.
      JavaScript
      Apache License 2.0
      107000Updated Dec 25, 2024Dec 25, 2024
    • The OMOP implementation on SQLMesh for the demo at the OHDSI Symposium 2024.
      Dockerfile
      4550Updated Dec 4, 2024Dec 4, 2024
    • Building HT patient cohort from data structured in OMOP CDM v5.4
      Python
      0000Updated Oct 24, 2024Oct 24, 2024
    • 0000Updated Oct 1, 2024Oct 1, 2024
    • Load OHDSI Vocab from Athena into PostgreSQL DB
      Python
      Apache License 2.0
      1433Updated Aug 2, 2024Aug 2, 2024
    • 0020Updated Jul 25, 2024Jul 25, 2024
    • Python
      1000Updated Mar 8, 2024Mar 8, 2024
    • Access Airtable data via Streamlit
      Python
      MIT License
      0105Updated Feb 7, 2024Feb 7, 2024
    • demo-dagster-sling

      Public archive
      Demonstration of a simple ELT pipeline with Sling and Dagster
      Python
      1100Updated Dec 2, 2023Dec 2, 2023
    • 1100Updated Oct 1, 2023Oct 1, 2023
    • omop-core

      Public
      Part of OMOP NHSO TCELS project
      Dockerfile
      00100Updated Sep 30, 2023Sep 30, 2023
    • Facilitate the linkage of OMOP CDM databases from different sources
      Apache License 2.0
      0200Updated Sep 27, 2023Sep 27, 2023
    • Hash a selected column from a CSV file
      Python
      Apache License 2.0
      1000Updated Sep 27, 2023Sep 27, 2023
    • pdpa

      Public
      Thai PDPA Website (Unofficial)
      JavaScript
      MIT License
      51103Updated Jun 10, 2023Jun 10, 2023
    • Automatically generate filled-in reports in PDF with data from MS SQL using Mail Merge & Python
      Python
      MIT License
      0005Updated Feb 20, 2023Feb 20, 2023
    • a simple template for deploying a Streamlit app on Heroku
      Python
      1005Updated Jan 2, 2023Jan 2, 2023
    • The work of OMOP on the dbt for demo in OHDSI Symposium 2022
      Python
      1300Updated Oct 23, 2022Oct 23, 2022
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