ANARCII is a generalised language model for antigen receptor numbering.
For the user guide please read the wiki page.
We have a live web tool:
https://opig.stats.ox.ac.uk/webapps/sabdab-sabpred/sabpred/anarcii/
If you use this code or the web tool in your work, please cite the paper.
All code is based on the following paper:
ANARCII: A Generalised Language Model for Antigen Receptor Numbering
https://www.biorxiv.org/content/10.1101/2025.04.16.648720v1
Please cite:
ANARCII: A Generalised Language Model for Antigen Receptor Numbering
Alexander Greenshields-Watson, Parth Agarwal, Sarah A Robinson, Benjamin Heathcote Williams, Gemma L Gordon, Henriette L Capel, Yushi Li, Fabian C Spoendlin, Fergus Boyles, Charlotte M Deane
bioRxiv 2025.04.16.648720; doi: https://doi.org/10.1101/2025.04.16.648720
Releases of this software are archived on Zenodo. If you use ANARCII in your work, please cite the paper. If you also want to cite the software specifically, this DOI always resolves to the Zenodo record for the latest version:
https://doi.org/10.5281/zenodo.15274840
If you want to cite a specific version, Zenodo provides individual DOIs for each, which you can find via the above link to the main record.