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Various fixes #11

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davedevelopment
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Sorry about the vague PR, I had to do a fair bit of hacking to get mutagenesis working on a test suite I wanted to try it on, by the time I'd finished I couldn't be bothered to split them out into separate PRs. If you don't want it all, perhaps you could cherry pick the commits that are acceptable.

@tjackowiak
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@padraic , could you merge this into master, please? This project is no longer working properly without them.

Verhaeg added a commit to Verhaeg/mutagenesis that referenced this pull request Sep 18, 2013
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