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* /version 1.5.0a0 * Fix after rebase (#241) * Update hydrocron-lambda.tf * Update pyproject.toml * update lock * fix lint * fix lint * /version 1.5.0a1 * Feature/issue 211 - Query track ingest table for granules with "to_ingest" status (#227) * /version 1.3.0a0 * Update build.yml * /version 1.3.0a1 * /version 1.3.0a2 * Feature/issue 175 - Update docs to point to OPS (#176) * changelog * update examples, remove load_data readme, info moved to wiki * Dependency update to fix snyk scan * issues/101: Support for HTTP Accept header (#172) * Reorganize timeseries code to prep for Accept header * Enable Accept header to return response of specific content-type * Fix whitespace and string continuation * Make error handling consistent and add an additional test where a reach can't be found * Update changelog with issue for unreleased version * Add 415 status code to API definition * Few minor cleanup items * Few minor cleanup items * Update to [email protected] * Fix dependencies --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.3.0a3 * issues/102: Support compression of API response (#173) * Enable payload compression * Update changelog with issue --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.3.0a4 * Feature/issue 100 Add option to 'compact' GeoJSON result into single feature (#177) * Reorganize timeseries code to prep for Accept header * Enable Accept header to return response of specific content-type * Fix whitespace and string continuation * Make error handling consistent and add an additional test where a reach can't be found * Update changelog with issue for unreleased version * Add 415 status code to API definition * Few minor cleanup items * Few minor cleanup items * Update to [email protected] * Fix dependencies * Update required query parameters based on current API functionality * Enable return of 'compact' GeoJSON response * Fix linting and add test data * Update documentation for API accept headers and compact GeoJSON response * Fix references to incorrect Accept header examples --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.3.0a5 * Feature/issue 183 (#185) * Provide introduction to timeseries endpoint * Remove _units in fields list * Fix typo * Update examples with Accept headers and compact query parameter * Add issue to changelog * Fix typo in timeseries documentation * Update pymysql * Update pymysql * Provide clarity on accept headers and request parameter fields * /version 1.3.0a6 * Feature/issue 186 Implement API keys (#188) * API Gateway Lambda authorizer to facilitate API keys and usage plans * Unit tests to test Lambda authorizer * Fix terraform file formatting * API Gateway Lambda Authorizer - Lambda function - API Keys and Authorizer definition in OpenAPI spec - API gateway API keys - API gateway usage plans - SSM parameters for API keys * Fix trailing whitespace * Set default region environment variable * Fix SNYK vulnerabilities * Add issue to changelog * Implement custom trusted partner header x-hydrocron-key * Update cryptography for SNYK vulnerability * Update documentation to include API key usage * Update quota and throttle settings for API Gateway * Update API keys documentation to indicate to be implemented * Move API key lookup to Lambda INIT * Remove API key authentication and update API key to x-hydrocron-key * /version 1.3.0a7 * Update changelog for 1.3.0 release * /version 1.4.0a0 * Feature/issue 198 (#207) * Update pylint to deal with errors and fix collection reference * Initial CMR and Hydrocron queries - Includes placeholders for other operations needed to track granule ingest. - GranuleUR query for Hydrocron tables. * Add and set up vcrpy for testing CMR API query * Test track ingest operations - Test CMR and hydrocron queries - Test granuleUR query - Update database to include granuleUR GSI * Update to use track_ingest naming consistently * Initial Lambda function and IAM role definition * Replace deprecated path function with as_file * Add SSM read IAM permissions * Add DynamoDB read permissions * Update track ingest lambda memory * Remove duplicate IAM permissions * Add in permissions to query index * Update changelog * Update changelog description * Use python_cmr for CMR API queries * /version 1.4.0a1 * Add doi to documentation pages (#216) * Update intro.md with DOI * Update overview.md with DOI * /version 1.4.0a2 * issue-193: Add Dynamo DB Table for SWOT Prior Lakes (#209) * add code to handle prior lakes shapefiles, add test prior lake data * update terraform to add prior lake table * fix tests, change to smaller test data file, changelog * linting * reconfigure main load_data method to make more readable and pass linting * lint * lint * fix string casting to lower storage req & update test responses to handle different rounding pattern in coords * update load benchmarking function for linting and add unit test * try parent collection for lakes * update version parsing for parent collection * fix case error * fix lake id reference * add logging to troubleshoot too large features * add item size logging and remove error raise for batch write * clean up logging statements & move numeric_columns assignment * update batch logging statement * Rename constant * Fix temp dir security risk https://rules.sonarsource.com/python/RSPEC-5443/ * Fix temp dir security risk https://rules.sonarsource.com/python/RSPEC-5443/ * fix code coverage calculation --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a3 * Feature/issue 201 Create a table for tracking granule ingest status (#214) * Define track ingest database and IAM permissions * Update changelog with issue * Modify table structure to support sparse status index * Updated to only apply PITR in ops --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a4 * Feature/issue 210 - Load large geometry polygons (#219) * add functions to handle null geometries and convert polygons to points * update doi in docs * fix fill null geometries * fix tests and update changelog * /version 1.4.0a5 * Feature/issue 222 - Add granule info to track ingest table on load (#223) * adjust lambdas to populate track ingest table on granule load * changelog * remove test cnm * lint * change error caught when handling checksum * update lambda role permissions to write to track ingest table * fix typo on lake table terraform * set default fill values for checksum and rev date in track status * fix checksum handling in bulk load data * lint * add logging to debug * /version 1.4.0a6 * Add SSM parameter read for last run time * Feature/issue-225: Create one track ingest table per feature type (#226) * add track ingest tables for each feature type and adjust load data to populate * changelog * /version 1.4.0a7 * Feature/issue 196 Add new feature type to query the API for lake data (#224) * Initial API queries for lake data * Unit tests for lake data * Updates after center point calculations - Removed temp code to calculate a point in API - Implemented unit test to test lake data retrieval - Updated fixtures to load in lake data for testing * Add read lake table permissions to lambda timeseries and track ingest roles * Update documenation to include lake data * Updated documentation to include info on lake centerpoints --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a8 * Feature/issue 205 - Add Confluence API key (#221) * Fix possible variable references before value is assigned * Define Confluence API key and trusted partner plan limits * Define a list of trusted partner keys and store under single parameter * Define API keys as encrypted envrionment variables for Lambda authorizer * Update authorizer and connection class to use KMS to retrieve API keys * Hack to force lambda deployment when ssm value changes (#218) * Add replace_triggered_by to hydrocron_lambda_authorizer * Introduce environment variable that contains random id which will change whenever an API key value changes. This will force lambda to publish new version of the function. * Remove unnecessary hash function * Update to SSM parameter API key storage and null_resource enviroment variable * Update Terraform and AWS provider * Update API key documentation * Set source_code_hash to force deployment of new image * Downgrade AWS provider to 4.0 to remove inline policy errors * Update docs/timeseries.md --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a9 * /version 1.4.0a10 * changelog for 1.4.0 release * /version 1.5.0a0 * Initial track ingest table query * Fix linting and code style * Implement feature count operations * Enable S3 permissions and set environment variable for track lambda * Fix trailing white spaces and code format * Update docstrings for class methods * Implement run time storage in SSM * Query track table unit tests * Update CHANGELOG with issue * Update SSM run time parameter * Fix trailing whitespace * Fix reference to IAM policy * Enable specification of temporal range to search revision date by * Fix SSM put parameter policy * Update IAM permissions for reading track ingest * Enable full temporal search on CMR granules * Add capability to download shapefile granule to count features * Update granule UR to include .zip * Count features via Hydrocron table query * Remove unnecessary s3 permissions * Remove whitespace from blank line * Update cryptography to 43.0.1 * update dependencies * upgrade geopandas * update dependencies --------- Co-authored-by: nikki-t <[email protected]> Co-authored-by: Frank Greguska <[email protected]> Co-authored-by: frankinspace <[email protected]> Co-authored-by: Victoria McDonald <[email protected]> Co-authored-by: Cassie Nickles <[email protected]> Co-authored-by: cassienickles <[email protected]> Co-authored-by: podaac-cicd[bot] <podaac-cicd[bot]@users.noreply.github.com> Co-authored-by: Victoria McDonald <[email protected]> Co-authored-by: torimcd <[email protected]> * /version 1.5.0a2 * Feature/issue 212 - Update track ingest table with granule status (#228) * /version 1.3.0a0 * Update build.yml * /version 1.3.0a1 * /version 1.3.0a2 * Feature/issue 175 - Update docs to point to OPS (#176) * changelog * update examples, remove load_data readme, info moved to wiki * Dependency update to fix snyk scan * issues/101: Support for HTTP Accept header (#172) * Reorganize timeseries code to prep for Accept header * Enable Accept header to return response of specific content-type * Fix whitespace and string continuation * Make error handling consistent and add an additional test where a reach can't be found * Update changelog with issue for unreleased version * Add 415 status code to API definition * Few minor cleanup items * Few minor cleanup items * Update to [email protected] * Fix dependencies --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.3.0a3 * issues/102: Support compression of API response (#173) * Enable payload compression * Update changelog with issue --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.3.0a4 * Feature/issue 100 Add option to 'compact' GeoJSON result into single feature (#177) * Reorganize timeseries code to prep for Accept header * Enable Accept header to return response of specific content-type * Fix whitespace and string continuation * Make error handling consistent and add an additional test where a reach can't be found * Update changelog with issue for unreleased version * Add 415 status code to API definition * Few minor cleanup items * Few minor cleanup items * Update to [email protected] * Fix dependencies * Update required query parameters based on current API functionality * Enable return of 'compact' GeoJSON response * Fix linting and add test data * Update documentation for API accept headers and compact GeoJSON response * Fix references to incorrect Accept header examples --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.3.0a5 * Feature/issue 183 (#185) * Provide introduction to timeseries endpoint * Remove _units in fields list * Fix typo * Update examples with Accept headers and compact query parameter * Add issue to changelog * Fix typo in timeseries documentation * Update pymysql * Update pymysql * Provide clarity on accept headers and request parameter fields * /version 1.3.0a6 * Feature/issue 186 Implement API keys (#188) * API Gateway Lambda authorizer to facilitate API keys and usage plans * Unit tests to test Lambda authorizer * Fix terraform file formatting * API Gateway Lambda Authorizer - Lambda function - API Keys and Authorizer definition in OpenAPI spec - API gateway API keys - API gateway usage plans - SSM parameters for API keys * Fix trailing whitespace * Set default region environment variable * Fix SNYK vulnerabilities * Add issue to changelog * Implement custom trusted partner header x-hydrocron-key * Update cryptography for SNYK vulnerability * Update documentation to include API key usage * Update quota and throttle settings for API Gateway * Update API keys documentation to indicate to be implemented * Move API key lookup to Lambda INIT * Remove API key authentication and update API key to x-hydrocron-key * /version 1.3.0a7 * Update changelog for 1.3.0 release * /version 1.4.0a0 * Feature/issue 198 (#207) * Update pylint to deal with errors and fix collection reference * Initial CMR and Hydrocron queries - Includes placeholders for other operations needed to track granule ingest. - GranuleUR query for Hydrocron tables. * Add and set up vcrpy for testing CMR API query * Test track ingest operations - Test CMR and hydrocron queries - Test granuleUR query - Update database to include granuleUR GSI * Update to use track_ingest naming consistently * Initial Lambda function and IAM role definition * Replace deprecated path function with as_file * Add SSM read IAM permissions * Add DynamoDB read permissions * Update track ingest lambda memory * Remove duplicate IAM permissions * Add in permissions to query index * Update changelog * Update changelog description * Use python_cmr for CMR API queries * /version 1.4.0a1 * Add doi to documentation pages (#216) * Update intro.md with DOI * Update overview.md with DOI * /version 1.4.0a2 * issue-193: Add Dynamo DB Table for SWOT Prior Lakes (#209) * add code to handle prior lakes shapefiles, add test prior lake data * update terraform to add prior lake table * fix tests, change to smaller test data file, changelog * linting * reconfigure main load_data method to make more readable and pass linting * lint * lint * fix string casting to lower storage req & update test responses to handle different rounding pattern in coords * update load benchmarking function for linting and add unit test * try parent collection for lakes * update version parsing for parent collection * fix case error * fix lake id reference * add logging to troubleshoot too large features * add item size logging and remove error raise for batch write * clean up logging statements & move numeric_columns assignment * update batch logging statement * Rename constant * Fix temp dir security risk https://rules.sonarsource.com/python/RSPEC-5443/ * Fix temp dir security risk https://rules.sonarsource.com/python/RSPEC-5443/ * fix code coverage calculation --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a3 * Feature/issue 201 Create a table for tracking granule ingest status (#214) * Define track ingest database and IAM permissions * Update changelog with issue * Modify table structure to support sparse status index * Updated to only apply PITR in ops --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a4 * Feature/issue 210 - Load large geometry polygons (#219) * add functions to handle null geometries and convert polygons to points * update doi in docs * fix fill null geometries * fix tests and update changelog * /version 1.4.0a5 * Feature/issue 222 - Add granule info to track ingest table on load (#223) * adjust lambdas to populate track ingest table on granule load * changelog * remove test cnm * lint * change error caught when handling checksum * update lambda role permissions to write to track ingest table * fix typo on lake table terraform * set default fill values for checksum and rev date in track status * fix checksum handling in bulk load data * lint * add logging to debug * /version 1.4.0a6 * Add SSM parameter read for last run time * Feature/issue-225: Create one track ingest table per feature type (#226) * add track ingest tables for each feature type and adjust load data to populate * changelog * /version 1.4.0a7 * Feature/issue 196 Add new feature type to query the API for lake data (#224) * Initial API queries for lake data * Unit tests for lake data * Updates after center point calculations - Removed temp code to calculate a point in API - Implemented unit test to test lake data retrieval - Updated fixtures to load in lake data for testing * Add read lake table permissions to lambda timeseries and track ingest roles * Update documenation to include lake data * Updated documentation to include info on lake centerpoints --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a8 * Feature/issue 205 - Add Confluence API key (#221) * Fix possible variable references before value is assigned * Define Confluence API key and trusted partner plan limits * Define a list of trusted partner keys and store under single parameter * Define API keys as encrypted envrionment variables for Lambda authorizer * Update authorizer and connection class to use KMS to retrieve API keys * Hack to force lambda deployment when ssm value changes (#218) * Add replace_triggered_by to hydrocron_lambda_authorizer * Introduce environment variable that contains random id which will change whenever an API key value changes. This will force lambda to publish new version of the function. * Remove unnecessary hash function * Update to SSM parameter API key storage and null_resource enviroment variable * Update Terraform and AWS provider * Update API key documentation * Set source_code_hash to force deployment of new image * Downgrade AWS provider to 4.0 to remove inline policy errors * Update docs/timeseries.md --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a9 * /version 1.4.0a10 * changelog for 1.4.0 release * /version 1.5.0a0 * Initial track ingest table query * Fix linting and code style * Implement feature count operations * Enable S3 permissions and set environment variable for track lambda * Fix trailing white spaces and code format * Update docstrings for class methods * Implement run time storage in SSM * Query track table unit tests * Update CHANGELOG with issue * Update SSM run time parameter * Fix trailing whitespace * Fix reference to IAM policy * Enable specification of temporal range to search revision date by * Fix SSM put parameter policy * Update IAM permissions for reading track ingest * Enable full temporal search on CMR granules * Add capability to download shapefile granule to count features * Update granule UR to include .zip * Count features via Hydrocron table query * Remove unnecessary s3 permissions * Remove whitespace from blank line * Update cryptography to 43.0.1 * Update track ingest table operations * Update changelog with issue * update dependencies * upgrade geopandas * update dependencies --------- Co-authored-by: nikki-t <[email protected]> Co-authored-by: Frank Greguska <[email protected]> Co-authored-by: frankinspace <[email protected]> Co-authored-by: Victoria McDonald <[email protected]> Co-authored-by: Cassie Nickles <[email protected]> Co-authored-by: cassienickles <[email protected]> Co-authored-by: podaac-cicd[bot] <podaac-cicd[bot]@users.noreply.github.com> Co-authored-by: Victoria McDonald <[email protected]> Co-authored-by: torimcd <[email protected]> * /version 1.5.0a3 * Feature/issue 203 - Construct CNM to trigger load data (#232) * /version 1.3.0a0 * Update build.yml * /version 1.3.0a1 * /version 1.3.0a2 * Feature/issue 175 - Update docs to point to OPS (#176) * changelog * update examples, remove load_data readme, info moved to wiki * Dependency update to fix snyk scan * issues/101: Support for HTTP Accept header (#172) * Reorganize timeseries code to prep for Accept header * Enable Accept header to return response of specific content-type * Fix whitespace and string continuation * Make error handling consistent and add an additional test where a reach can't be found * Update changelog with issue for unreleased version * Add 415 status code to API definition * Few minor cleanup items * Few minor cleanup items * Update to [email protected] * Fix dependencies --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.3.0a3 * issues/102: Support compression of API response (#173) * Enable payload compression * Update changelog with issue --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.3.0a4 * Feature/issue 100 Add option to 'compact' GeoJSON result into single feature (#177) * Reorganize timeseries code to prep for Accept header * Enable Accept header to return response of specific content-type * Fix whitespace and string continuation * Make error handling consistent and add an additional test where a reach can't be found * Update changelog with issue for unreleased version * Add 415 status code to API definition * Few minor cleanup items * Few minor cleanup items * Update to [email protected] * Fix dependencies * Update required query parameters based on current API functionality * Enable return of 'compact' GeoJSON response * Fix linting and add test data * Update documentation for API accept headers and compact GeoJSON response * Fix references to incorrect Accept header examples --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.3.0a5 * Feature/issue 183 (#185) * Provide introduction to timeseries endpoint * Remove _units in fields list * Fix typo * Update examples with Accept headers and compact query parameter * Add issue to changelog * Fix typo in timeseries documentation * Update pymysql * Update pymysql * Provide clarity on accept headers and request parameter fields * /version 1.3.0a6 * Feature/issue 186 Implement API keys (#188) * API Gateway Lambda authorizer to facilitate API keys and usage plans * Unit tests to test Lambda authorizer * Fix terraform file formatting * API Gateway Lambda Authorizer - Lambda function - API Keys and Authorizer definition in OpenAPI spec - API gateway API keys - API gateway usage plans - SSM parameters for API keys * Fix trailing whitespace * Set default region environment variable * Fix SNYK vulnerabilities * Add issue to changelog * Implement custom trusted partner header x-hydrocron-key * Update cryptography for SNYK vulnerability * Update documentation to include API key usage * Update quota and throttle settings for API Gateway * Update API keys documentation to indicate to be implemented * Move API key lookup to Lambda INIT * Remove API key authentication and update API key to x-hydrocron-key * /version 1.3.0a7 * Update changelog for 1.3.0 release * /version 1.4.0a0 * Feature/issue 198 (#207) * Update pylint to deal with errors and fix collection reference * Initial CMR and Hydrocron queries - Includes placeholders for other operations needed to track granule ingest. - GranuleUR query for Hydrocron tables. * Add and set up vcrpy for testing CMR API query * Test track ingest operations - Test CMR and hydrocron queries - Test granuleUR query - Update database to include granuleUR GSI * Update to use track_ingest naming consistently * Initial Lambda function and IAM role definition * Replace deprecated path function with as_file * Add SSM read IAM permissions * Add DynamoDB read permissions * Update track ingest lambda memory * Remove duplicate IAM permissions * Add in permissions to query index * Update changelog * Update changelog description * Use python_cmr for CMR API queries * /version 1.4.0a1 * Add doi to documentation pages (#216) * Update intro.md with DOI * Update overview.md with DOI * /version 1.4.0a2 * issue-193: Add Dynamo DB Table for SWOT Prior Lakes (#209) * add code to handle prior lakes shapefiles, add test prior lake data * update terraform to add prior lake table * fix tests, change to smaller test data file, changelog * linting * reconfigure main load_data method to make more readable and pass linting * lint * lint * fix string casting to lower storage req & update test responses to handle different rounding pattern in coords * update load benchmarking function for linting and add unit test * try parent collection for lakes * update version parsing for parent collection * fix case error * fix lake id reference * add logging to troubleshoot too large features * add item size logging and remove error raise for batch write * clean up logging statements & move numeric_columns assignment * update batch logging statement * Rename constant * Fix temp dir security risk https://rules.sonarsource.com/python/RSPEC-5443/ * Fix temp dir security risk https://rules.sonarsource.com/python/RSPEC-5443/ * fix code coverage calculation --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a3 * Feature/issue 201 Create a table for tracking granule ingest status (#214) * Define track ingest database and IAM permissions * Update changelog with issue * Modify table structure to support sparse status index * Updated to only apply PITR in ops --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a4 * Feature/issue 210 - Load large geometry polygons (#219) * add functions to handle null geometries and convert polygons to points * update doi in docs * fix fill null geometries * fix tests and update changelog * /version 1.4.0a5 * Feature/issue 222 - Add granule info to track ingest table on load (#223) * adjust lambdas to populate track ingest table on granule load * changelog * remove test cnm * lint * change error caught when handling checksum * update lambda role permissions to write to track ingest table * fix typo on lake table terraform * set default fill values for checksum and rev date in track status * fix checksum handling in bulk load data * lint * add logging to debug * /version 1.4.0a6 * Add SSM parameter read for last run time * Feature/issue-225: Create one track ingest table per feature type (#226) * add track ingest tables for each feature type and adjust load data to populate * changelog * /version 1.4.0a7 * Feature/issue 196 Add new feature type to query the API for lake data (#224) * Initial API queries for lake data * Unit tests for lake data * Updates after center point calculations - Removed temp code to calculate a point in API - Implemented unit test to test lake data retrieval - Updated fixtures to load in lake data for testing * Add read lake table permissions to lambda timeseries and track ingest roles * Update documenation to include lake data * Updated documentation to include info on lake centerpoints --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a8 * Feature/issue 205 - Add Confluence API key (#221) * Fix possible variable references before value is assigned * Define Confluence API key and trusted partner plan limits * Define a list of trusted partner keys and store under single parameter * Define API keys as encrypted envrionment variables for Lambda authorizer * Update authorizer and connection class to use KMS to retrieve API keys * Hack to force lambda deployment when ssm value changes (#218) * Add replace_triggered_by to hydrocron_lambda_authorizer * Introduce environment variable that contains random id which will change whenever an API key value changes. This will force lambda to publish new version of the function. * Remove unnecessary hash function * Update to SSM parameter API key storage and null_resource enviroment variable * Update Terraform and AWS provider * Update API key documentation * Set source_code_hash to force deployment of new image * Downgrade AWS provider to 4.0 to remove inline policy errors * Update docs/timeseries.md --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a9 * /version 1.4.0a10 * changelog for 1.4.0 release * /version 1.5.0a0 * Initial track ingest table query * Fix linting and code style * Implement feature count operations * Enable S3 permissions and set environment variable for track lambda * Fix trailing white spaces and code format * Update docstrings for class methods * Implement run time storage in SSM * Query track table unit tests * Update CHANGELOG with issue * Update SSM run time parameter * Fix trailing whitespace * Fix reference to IAM policy * Enable specification of temporal range to search revision date by * Fix SSM put parameter policy * Update IAM permissions for reading track ingest * Enable full temporal search on CMR granules * Add capability to download shapefile granule to count features * Update granule UR to include .zip * Count features via Hydrocron table query * Remove unnecessary s3 permissions * Remove whitespace from blank line * Update cryptography to 43.0.1 * Update track ingest table operations * Update changelog with issue * update dependencies * upgrade geopandas * update dependencies * Implement operations to publish CNM messages for granules requiring ingest * Implement unit test of publication operations * Fix linting * Add issue to changelog and fix linting * Add EventBridge schedules with appropriate Lambda permissions * Set initial schedule expressions and fix assume policy * Disable eventbridge schedules by default * Update schedule to run weekly * Define 1 hour latency to search by revision_date in CMR --------- Co-authored-by: nikki-t <[email protected]> Co-authored-by: Frank Greguska <[email protected]> Co-authored-by: frankinspace <[email protected]> Co-authored-by: Victoria McDonald <[email protected]> Co-authored-by: Cassie Nickles <[email protected]> Co-authored-by: cassienickles <[email protected]> Co-authored-by: podaac-cicd[bot] <podaac-cicd[bot]@users.noreply.github.com> Co-authored-by: Victoria McDonald <[email protected]> Co-authored-by: torimcd <[email protected]> * Feature/issue 236: Update track ingest to allow UAT query of CMR (#240) * /version 1.3.0a0 * Update build.yml * /version 1.3.0a1 * /version 1.3.0a2 * Feature/issue 175 - Update docs to point to OPS (#176) * changelog * update examples, remove load_data readme, info moved to wiki * Dependency update to fix snyk scan * issues/101: Support for HTTP Accept header (#172) * Reorganize timeseries code to prep for Accept header * Enable Accept header to return response of specific content-type * Fix whitespace and string continuation * Make error handling consistent and add an additional test where a reach can't be found * Update changelog with issue for unreleased version * Add 415 status code to API definition * Few minor cleanup items * Few minor cleanup items * Update to [email protected] * Fix dependencies --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.3.0a3 * issues/102: Support compression of API response (#173) * Enable payload compression * Update changelog with issue --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.3.0a4 * Feature/issue 100 Add option to 'compact' GeoJSON result into single feature (#177) * Reorganize timeseries code to prep for Accept header * Enable Accept header to return response of specific content-type * Fix whitespace and string continuation * Make error handling consistent and add an additional test where a reach can't be found * Update changelog with issue for unreleased version * Add 415 status code to API definition * Few minor cleanup items * Few minor cleanup items * Update to [email protected] * Fix dependencies * Update required query parameters based on current API functionality * Enable return of 'compact' GeoJSON response * Fix linting and add test data * Update documentation for API accept headers and compact GeoJSON response * Fix references to incorrect Accept header examples --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.3.0a5 * Feature/issue 183 (#185) * Provide introduction to timeseries endpoint * Remove _units in fields list * Fix typo * Update examples with Accept headers and compact query parameter * Add issue to changelog * Fix typo in timeseries documentation * Update pymysql * Update pymysql * Provide clarity on accept headers and request parameter fields * /version 1.3.0a6 * Feature/issue 186 Implement API keys (#188) * API Gateway Lambda authorizer to facilitate API keys and usage plans * Unit tests to test Lambda authorizer * Fix terraform file formatting * API Gateway Lambda Authorizer - Lambda function - API Keys and Authorizer definition in OpenAPI spec - API gateway API keys - API gateway usage plans - SSM parameters for API keys * Fix trailing whitespace * Set default region environment variable * Fix SNYK vulnerabilities * Add issue to changelog * Implement custom trusted partner header x-hydrocron-key * Update cryptography for SNYK vulnerability * Update documentation to include API key usage * Update quota and throttle settings for API Gateway * Update API keys documentation to indicate to be implemented * Move API key lookup to Lambda INIT * Remove API key authentication and update API key to x-hydrocron-key * /version 1.3.0a7 * Update changelog for 1.3.0 release * /version 1.4.0a0 * Feature/issue 198 (#207) * Update pylint to deal with errors and fix collection reference * Initial CMR and Hydrocron queries - Includes placeholders for other operations needed to track granule ingest. - GranuleUR query for Hydrocron tables. * Add and set up vcrpy for testing CMR API query * Test track ingest operations - Test CMR and hydrocron queries - Test granuleUR query - Update database to include granuleUR GSI * Update to use track_ingest naming consistently * Initial Lambda function and IAM role definition * Replace deprecated path function with as_file * Add SSM read IAM permissions * Add DynamoDB read permissions * Update track ingest lambda memory * Remove duplicate IAM permissions * Add in permissions to query index * Update changelog * Update changelog description * Use python_cmr for CMR API queries * /version 1.4.0a1 * Add doi to documentation pages (#216) * Update intro.md with DOI * Update overview.md with DOI * /version 1.4.0a2 * issue-193: Add Dynamo DB Table for SWOT Prior Lakes (#209) * add code to handle prior lakes shapefiles, add test prior lake data * update terraform to add prior lake table * fix tests, change to smaller test data file, changelog * linting * reconfigure main load_data method to make more readable and pass linting * lint * lint * fix string casting to lower storage req & update test responses to handle different rounding pattern in coords * update load benchmarking function for linting and add unit test * try parent collection for lakes * update version parsing for parent collection * fix case error * fix lake id reference * add logging to troubleshoot too large features * add item size logging and remove error raise for batch write * clean up logging statements & move numeric_columns assignment * update batch logging statement * Rename constant * Fix temp dir security risk https://rules.sonarsource.com/python/RSPEC-5443/ * Fix temp dir security risk https://rules.sonarsource.com/python/RSPEC-5443/ * fix code coverage calculation --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a3 * Feature/issue 201 Create a table for tracking granule ingest status (#214) * Define track ingest database and IAM permissions * Update changelog with issue * Modify table structure to support sparse status index * Updated to only apply PITR in ops --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a4 * Feature/issue 210 - Load large geometry polygons (#219) * add functions to handle null geometries and convert polygons to points * update doi in docs * fix fill null geometries * fix tests and update changelog * /version 1.4.0a5 * Feature/issue 222 - Add granule info to track ingest table on load (#223) * adjust lambdas to populate track ingest table on granule load * changelog * remove test cnm * lint * change error caught when handling checksum * update lambda role permissions to write to track ingest table * fix typo on lake table terraform * set default fill values for checksum and rev date in track status * fix checksum handling in bulk load data * lint * add logging to debug * /version 1.4.0a6 * Add SSM parameter read for last run time * Feature/issue-225: Create one track ingest table per feature type (#226) * add track ingest tables for each feature type and adjust load data to populate * changelog * /version 1.4.0a7 * Feature/issue 196 Add new feature type to query the API for lake data (#224) * Initial API queries for lake data * Unit tests for lake data * Updates after center point calculations - Removed temp code to calculate a point in API - Implemented unit test to test lake data retrieval - Updated fixtures to load in lake data for testing * Add read lake table permissions to lambda timeseries and track ingest roles * Update documenation to include lake data * Updated documentation to include info on lake centerpoints --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a8 * Feature/issue 205 - Add Confluence API key (#221) * Fix possible variable references before value is assigned * Define Confluence API key and trusted partner plan limits * Define a list of trusted partner keys and store under single parameter * Define API keys as encrypted envrionment variables for Lambda authorizer * Update authorizer and connection class to use KMS to retrieve API keys * Hack to force lambda deployment when ssm value changes (#218) * Add replace_triggered_by to hydrocron_lambda_authorizer * Introduce environment variable that contains random id which will change whenever an API key value changes. This will force lambda to publish new version of the function. * Remove unnecessary hash function * Update to SSM parameter API key storage and null_resource enviroment variable * Update Terraform and AWS provider * Update API key documentation * Set source_code_hash to force deployment of new image * Downgrade AWS provider to 4.0 to remove inline policy errors * Update docs/timeseries.md --------- Co-authored-by: Frank Greguska <[email protected]> * /version 1.4.0a9 * /version 1.4.0a10 * changelog for 1.4.0 release * update dependencies for 1.4.0 release * /version 1.5.0a0 * fix CMR query in UAT * /version 1.4.0rc1 * fix typo in load_data lambda * /version 1.4.0rc2 * Initial track ingest table query * Fix linting and code style * Implement feature count operations * Enable S3 permissions and set environment variable for track lambda * Fix trailing white spaces and code format * Update docstrings for class methods * Implement run time storage in SSM * Query track table unit tests * Update CHANGELOG with issue * Update SSM run time parameter * Fix trailing whitespace * Fix reference to IAM policy * Enable specification of temporal range to search revision date by * Fix SSM put parameter policy * Update IAM permissions for reading track ingest * Enable full temporal search on CMR granules * Add capability to download shapefile granule to count features * Update granule UR to include .zip * Count features via Hydrocron table query * Remove unnecessary s3 permissions * Remove whitespace from blank line * Update cryptography to 43.0.1 * Update track ingest table operations * Update changelog with issue * update dependencies * upgrade geopandas * update dependencies * fix index on rev date in load data lambda * update dependencies * lint readme * /version 1.4.0rc3 * /version 1.4.0rc4 * Implement operations to publish CNM messages for granules requiring ingest * Implement unit test of publication operations * Fix linting * Add issue to changelog and fix linting * Add EventBridge schedules with appropriate Lambda permissions * Set initial schedule expressions and fix assume policy * fix cmr env search by venue * /version 1.4.0rc5 * Disable eventbridge schedules by default * Update schedule to run weekly * Define 1 hour latency to search by revision_date in CMR * Allow CMR UAT query based on HYDROCRON_ENV environment variable * Update unit tests to accomodate UAT CMR query * Add earthdata login credentials to Lambda * Add issue to changelog * Fix linting white space --------- Co-authored-by: nikki-t <[email protected]> Co-authored-by: Frank Greguska <[email protected]> Co-authored-by: frankinspace <[email protected]> Co-authored-by: Victoria McDonald <[email protected]> Co-authored-by: Cassie Nickles <[email protected]> Co-authored-by: cassienickles <[email protected]> Co-authored-by: podaac-cicd[bot] <podaac-cicd[bot]@users.noreply.github.com> Co-authored-by: Victoria McDonald <[email protected]> Co-authored-by: torimcd <[email protected]> * /version 1.5.0a4 * /version 1.6.0a0 * /version 1.5.0a1 * Feature/issue 235 - Track ingest table can be populated with granules that aren't loaded into Hydrocron (#245) * Raise an error if collection shortname does not match Hydrocron table names * Raise an error unsupported lake data in load granule operations * Remove trailing whitespace * Fix code formatting * Update CHANGELOG with issue * Feature/issue 248 - Track ingest operations need to query UAT for granule files (#249) * Query to return granule files should query UAT when running in SIT or UAT environments * SIT execution should return UAT files for load granule operations * Set venue environment variable before running test of query_cmr * Add issue to CHANGELOG * /version 1.5.0a2 * Update readme and changelog (#253) * /version 1.5.0a3 * Feature/issue 250 - Handle overlapping times with unique CRIDS (#257) * Handle overlapping times with unique CRIDs * Define unit test to test when reprocessed granule arrives * Add issue to CHANGELOG * Add reprocessed CRID to eventbridge schedule input * Handle cases with empty reprocessed_crid * /version 1.5.0a4 * Feature/issue 258 - Granules with large numbers of features cannot be loadedd (#259) * change assemble attrs function to avoid for loop * change how attributes are concatenated during shp unpack to avoid slow looping * remove unused import * Update API test data with less precise data coordinates * remove logging every item in batch writer * lint --------- Co-authored-by: Nikki <[email protected]> * /version 1.5.0a5 * 1.5.0 release and unreleased section * /version 1.6.0a0 * /version 1.5.0a0 * Feature/issue 229 - Create new database tables for version D collections (#260) * Add version d db tables, update load_data module to handle changing constants * linting * rework constants to sustain version changes, update tests * lint * fix changelog * /version 1.5.0a1 * update version * Feature/issue 229 - reapply db tables after fixing tags (#264) * Add version d db tables, update load_data module to handle changing constants * linting * rework constants to sustain version changes, update tests * lint * fix changelog * update readme to force rebuild (#266) * /version 1.6.0a1 * /version 1.6.0a2 * Feature/issue 233 - Create new API parameter for user to specify data version (#268) * Move track ingest constants and fix table info * Accept and validate collection_name query parameter * Determine table data to query on based off of collection and feature type * Log collection name and fix bug that interates over table info * Fix table_name reference in table info * Linting recommendations fix * Add api_feature_type to determine correct table info * Modified for new env vars and added additional test of collection name * Add issues to changelog * Fix reference to default collection version in Lambda environment variables * /version 1.6.0a3 * 267 - Modify track ingest operations to support new collection versions (#271) * Remove hydrocron tables in input parameters and duplicate overlap detection * Add version D track ingest tables, remove table input parameters, and fix formatting * Fix bug when raising table mismatch error for collection shortname * Add issue to changelog * /version 1.6.0a4 * Feature/issue 273 - Modify the logging of the timeseries Lambda response object to reduce the log statement size (#274) * Modify response logging to only include status, time, and hits * Update changelog with issue * Log errors with HTTP code and error message for all error types * Log CNM message with double quotes * Update changelog for new release candidate * Update depenedencies * Update vcrpy and cassettes to resolve missing version_string * /version 1.6.0rc1 * Remove no-update flag from poetry lock command * /version 1.6.0rc2 * Add version D SWOT and track ingest tables to IAM Dynamo policies (#276) * Add version D SWOT and track ingest tables to IAM Dynamo policies * /version 1.6.0rc3 --------- Co-authored-by: nikki-t <[email protected]> * /version 1.6.0rc4 * Update default and constant variables for version D collection * Fix tests so that any change to the collection version does not impact results * /version 1.6.0rc5 * Modify for version D data but default to 2.0 collection for API * /version 1.6.0rc6 * Update track ingest reprocessed CRID to PID0 * /version 1.6.0rc7 * Feature/issue-234 Reorganize docs and add versioning section (#269) * Reorganize docs and add versioning section * changelog * fix typos, minor phrasing in docs * /version 1.6.0rc8 * Update runtime SSM parameter name for collection * /version 1.6.0rc9 * Update to emptry reprocessed CRID * /version 1.6.0rc10 --------- Co-authored-by: nikki-t <[email protected]> Co-authored-by: Frank Greguska <[email protected]> Co-authored-by: frankinspace <[email protected]> Co-authored-by: Nikki Tebaldi <[email protected]> Co-authored-by: Cassie Nickles <[email protected]> Co-authored-by: cassienickles <[email protected]> Co-authored-by: podaac-cicd[bot] <podaac-cicd[bot]@users.noreply.github.com> Co-authored-by: torimcd <[email protected]> Co-authored-by: James Wood <[email protected]>
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