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pohl-michel/README.md

Welcome to my GitHub page! My experience spans computer vision, natural language processing, graph machine learning, and time-series forecasting. I am particularly interested in online learning, sequence modeling with transformers, video prediction, and generative AI. I currently work at Brainomix (Oxford, UK), where I explore machine learning for computer-aided diagnosis of interstitial lung diseases.

Selected open-source projects:

Chest and liver cine-MRI prediction using PCA-based motion modeling and temporal dynamics forecasting with RNNs trained online and transformers Deformable 3D image registration using the pyramidal, iterative Lucas–Kanade optical-flow algorithm

6-step-ahead prediction of sagittal cine-MRI cross-sections using sparse one-step approximation (left: ground truth, right: prediction).

Estimation of breathing-related 3D lung-tumor motion using deformable image registration.

Time-series forecasting using RNNs trained online and transformers

Prediction of the 3D positions of 3 markers on the chest of a subject 2.1s in advance (i.e., 7 time steps ahead, at a sampling rate of 3.33Hz) using RNNs trained with decoupled neural interfaces, enabling latency compensation during lung radiotherapy treatment.

Pinned Loading

  1. 2D-MR-image-prediction 2D-MR-image-prediction Public

    Respiratory motion forecasting from thoraco-abdominal cine MRI and external-marker position time series using RNNs trained online and transformers

    Jupyter Notebook 4

  2. time-series-forecasting-uoro-rtrl time-series-forecasting-uoro-rtrl Public

    Multivariate respiratory-motion time-series forecasting using recurrent neural networks trained with unbiased online recurrent optimization (UORO) and real-time recurrent learning (RTRL)

    MATLAB 17 5

  3. 3D-Lucas-Kanade-optical-flow 3D-Lucas-Kanade-optical-flow Public

    Volumetric image registration with the pyramidal, iterative Lucas–Kanade optical-flow algorithm

    MATLAB 9

  4. fourier-glrt-based-graph-classification fourier-glrt-based-graph-classification Public

    Binary classification of graph-structured data via generalized likelihood ratio testing (GLRT) and graph Fourier transforms, and application to Alzheimer's disease detection from PET data

    MATLAB

  5. fibre_bundle_modeling fibre_bundle_modeling Public

    Effective Young’s modulus estimation for a periodic fiber-bundle structure using coupled differential equations and transfer-matrix triangularization

    MATLAB