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Refactoring/fixing zarr-pyhton v3 incompatibilities in xarray datatrees #16580

Refactoring/fixing zarr-pyhton v3 incompatibilities in xarray datatrees

Refactoring/fixing zarr-pyhton v3 incompatibilities in xarray datatrees #16580

Triggered via pull request March 13, 2025 15:21
Status Success
Total duration 18m 27s
Artifacts 14

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149 warnings and 36 notices
ubuntu-latest py3.13 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw1/test_download_from_github0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='d5808805-c005-4877-ac48-baaf2987eebc'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.13 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw1/test_download_from_github0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='d5808805-c005-4877-ac48-baaf2987eebc'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.13 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw1/test_download_from_github_load0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='76a608d2-ca17-4ddc-ad90-9d4e1223b673'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.13 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw1/test_download_from_github_load0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='401ae152-38d4-416f-a0de-988be0f90ac4'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.13 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw1/test_download_from_github_load0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='76a608d2-ca17-4ddc-ad90-9d4e1223b673'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.13 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw1/test_download_from_github_load0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='401ae152-38d4-416f-a0de-988be0f90ac4'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.13 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/pydap/handlers/dap.py#L123
PyDAP was unable to determine the DAP protocol defaulting to DAP2 which is consider legacy and may result in slower responses. For more, see go to https://www.opendap.org/faq-page.
ubuntu-latest py3.13 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/pydap/handlers/dap.py#L123
PyDAP was unable to determine the DAP protocol defaulting to DAP2 which is consider legacy and may result in slower responses. For more, see go to https://www.opendap.org/faq-page.
ubuntu-latest py3.13 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/pydap/cas/get_cookies.py#L164
Call to deprecated method findAll. (Replaced by find_all) -- Deprecated since version 4.0.0.
ubuntu-latest py3.13 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/pydap/cas/get_cookies.py#L168
Call to deprecated method findAll. (Replaced by find_all) -- Deprecated since version 4.0.0.
ubuntu-latest py3.13 flaky
Unexpected input(s) 'file', valid inputs are ['base_sha', 'binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'disable_telem', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'force', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'recurse_submodules', 'report_code', 'report_type', 'root_dir', 'run_command', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'use_pypi', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.13 flaky
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.13 flaky
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10 bare-minimum
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10 bare-minimum
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10 bare-minimum
Unexpected input(s) 'file', valid inputs are ['base_sha', 'binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'disable_telem', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'force', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'recurse_submodules', 'report_code', 'report_type', 'root_dir', 'run_command', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'use_pypi', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.10 mypy
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10 mypy
Unexpected input(s) 'file', valid inputs are ['base_sha', 'binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'disable_telem', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'force', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'recurse_submodules', 'report_code', 'report_type', 'root_dir', 'run_command', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'use_pypi', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.10 mypy
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.13 mypy
Unexpected input(s) 'file', valid inputs are ['base_sha', 'binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'disable_telem', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'force', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'recurse_submodules', 'report_code', 'report_type', 'root_dir', 'run_command', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'use_pypi', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.13 mypy
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.13 mypy
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest py3.10
Unexpected input(s) 'file', valid inputs are ['base_sha', 'binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'disable_telem', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'force', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'recurse_submodules', 'report_code', 'report_type', 'root_dir', 'run_command', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'use_pypi', 'verbose', 'version', 'working-directory']
macos-latest py3.10: Users/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
macos-latest py3.10: Users/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
macos-latest py3.10: xarray/core/duck_array_ops.py#L232
invalid value encountered in cast
macos-latest py3.10: xarray/core/duck_array_ops.py#L232
invalid value encountered in cast
macos-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12 all-but-dask
Unexpected input(s) 'file', valid inputs are ['base_sha', 'binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'disable_telem', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'force', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'recurse_submodules', 'report_code', 'report_type', 'root_dir', 'run_command', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'use_pypi', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.12 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.12 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.12 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.12 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.12 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.12 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.12 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.12 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.12 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.12 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.::warning file=/home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py,line=203::Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.12 all-but-dask
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12 all-but-dask
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest py3.13
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest py3.13
Unexpected input(s) 'file', valid inputs are ['base_sha', 'binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'disable_telem', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'force', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'recurse_submodules', 'report_code', 'report_type', 'root_dir', 'run_command', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'use_pypi', 'verbose', 'version', 'working-directory']
macos-latest py3.13
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest py3.13: Users/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
macos-latest py3.13: Users/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
macos-latest py3.13: Users/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
macos-latest py3.13: Users/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
macos-latest py3.13: Users/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
macos-latest py3.13: Users/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
macos-latest py3.13: Users/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
macos-latest py3.13: Users/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
macos-latest py3.13: Users/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
macos-latest py3.13: Users/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/api/asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.10 min-all-deps
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L237
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L237
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L237
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L237
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L237
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L237
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L237
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L237
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L237
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L237
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps
Unexpected input(s) 'file', valid inputs are ['base_sha', 'binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'disable_telem', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'force', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'recurse_submodules', 'report_code', 'report_type', 'root_dir', 'run_command', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'use_pypi', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.10 min-all-deps
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.13 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/codecs/vlen_utf8.py#L44
The codec `vlen-utf8` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/core/array.py#L3989
The dtype `<U1` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/codecs/vlen_utf8.py#L44
The codec `vlen-utf8` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/core/array.py#L3989
The dtype `<U6` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/codecs/vlen_utf8.py#L99
The codec `vlen-bytes` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/core/array.py#L3989
The dtype `|S6` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/codecs/vlen_utf8.py#L44
The codec `vlen-utf8` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/codecs/vlen_utf8.py#L44
The codec `vlen-utf8` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/codecs/vlen_utf8.py#L44
The codec `vlen-utf8` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/core/array.py#L3989
The dtype `<U1` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13 all-but-numba
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.13 all-but-numba
Unexpected input(s) 'file', valid inputs are ['base_sha', 'binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'disable_telem', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'force', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'recurse_submodules', 'report_code', 'report_type', 'root_dir', 'run_command', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'use_pypi', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.13 all-but-numba
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10: home/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
ubuntu-latest py3.10: home/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
ubuntu-latest py3.10: xarray/core/duck_array_ops.py#L232
invalid value encountered in cast
ubuntu-latest py3.10: xarray/core/duck_array_ops.py#L232
invalid value encountered in cast
ubuntu-latest py3.10
Unexpected input(s) 'file', valid inputs are ['base_sha', 'binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'disable_telem', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'force', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'recurse_submodules', 'report_code', 'report_type', 'root_dir', 'run_command', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'use_pypi', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.13
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.13
Unexpected input(s) 'file', valid inputs are ['base_sha', 'binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'disable_telem', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'force', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'recurse_submodules', 'report_code', 'report_type', 'root_dir', 'run_command', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'use_pypi', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.13: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/codecs/vlen_utf8.py#L44
The codec `vlen-utf8` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/core/array.py#L3989
The dtype `<U6` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/codecs/vlen_utf8.py#L99
The codec `vlen-bytes` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/core/array.py#L3989
The dtype `|S6` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/codecs/vlen_utf8.py#L44
The codec `vlen-utf8` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/core/array.py#L3989
The dtype `<U1` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/codecs/vlen_utf8.py#L44
The codec `vlen-utf8` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/codecs/vlen_utf8.py#L99
The codec `vlen-bytes` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/codecs/vlen_utf8.py#L44
The codec `vlen-utf8` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13: home/runner/micromamba/envs/xarray-tests/lib/python3.13/site-packages/zarr/codecs/vlen_utf8.py#L44
The codec `vlen-utf8` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.13
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
windows-latest py3.10
Unexpected input(s) 'file', valid inputs are ['base_sha', 'binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'disable_telem', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'force', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'recurse_submodules', 'report_code', 'report_type', 'root_dir', 'run_command', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'use_pypi', 'verbose', 'version', 'working-directory']
windows-latest py3.10: C:\Users\runneradmin\micromamba\envs\xarray-tests\lib\site-packages\zarr\_storage\store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
windows-latest py3.10: C:\Users\runneradmin\micromamba\envs\xarray-tests\lib\site-packages\zarr\_storage\store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
windows-latest py3.10: xarray/core/duck_array_ops.py#L232
invalid value encountered in cast
windows-latest py3.10: xarray/core/duck_array_ops.py#L232
invalid value encountered in cast
windows-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
windows-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
windows-latest py3.13
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
windows-latest py3.13
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
windows-latest py3.13
Unexpected input(s) 'file', valid inputs are ['base_sha', 'binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'disable_telem', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'force', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'recurse_submodules', 'report_code', 'report_type', 'root_dir', 'run_command', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'use_pypi', 'verbose', 'version', 'working-directory']
windows-latest py3.13: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\codecs\vlen_utf8.py#L99
The codec `vlen-bytes` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
windows-latest py3.13: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\codecs\vlen_utf8.py#L99
The codec `vlen-bytes` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
windows-latest py3.13: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\array.py#L3989
The dtype `|S6` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
windows-latest py3.13: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\codecs\vlen_utf8.py#L44
The codec `vlen-utf8` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
windows-latest py3.13: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\array.py#L3989
The dtype `<U6` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
windows-latest py3.13: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\array.py#L3989
The dtype `<U1` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
windows-latest py3.13: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\codecs\vlen_utf8.py#L99
The codec `vlen-bytes` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
windows-latest py3.13: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\codecs\vlen_utf8.py#L44
The codec `vlen-utf8` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
windows-latest py3.13: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\api\asynchronous.py#L203
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
windows-latest py3.13: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\array.py#L3989
The dtype `|S6` is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
2378 skipped tests found (test 1 to 569)
There are 2378 skipped tests, see "Raw output" for the list of skipped tests 1 to 569.
2378 skipped tests found (test 570 to 1263)
There are 2378 skipped tests, see "Raw output" for the list of skipped tests 570 to 1263.
2378 skipped tests found (test 1264 to 1972)
There are 2378 skipped tests, see "Raw output" for the list of skipped tests 1264 to 1972.
2378 skipped tests found (test 1973 to 2378)
There are 2378 skipped tests, see "Raw output" for the list of skipped tests 1973 to 2378.
22547 tests found (test 1 to 868)
There are 22547 tests, see "Raw output" for the list of tests 1 to 868.
22547 tests found (test 869 to 1547)
There are 22547 tests, see "Raw output" for the list of tests 869 to 1547.
22547 tests found (test 1548 to 2195)
There are 22547 tests, see "Raw output" for the list of tests 1548 to 2195.
22547 tests found (test 2196 to 2833)
There are 22547 tests, see "Raw output" for the list of tests 2196 to 2833.
22547 tests found (test 2834 to 3508)
There are 22547 tests, see "Raw output" for the list of tests 2834 to 3508.
22547 tests found (test 3509 to 4051)
There are 22547 tests, see "Raw output" for the list of tests 3509 to 4051.
22547 tests found (test 4052 to 4631)
There are 22547 tests, see "Raw output" for the list of tests 4052 to 4631.
22547 tests found (test 4632 to 5282)
There are 22547 tests, see "Raw output" for the list of tests 4632 to 5282.
22547 tests found (test 5283 to 5940)
There are 22547 tests, see "Raw output" for the list of tests 5283 to 5940.
22547 tests found (test 5941 to 6737)
There are 22547 tests, see "Raw output" for the list of tests 5941 to 6737.
22547 tests found (test 6738 to 7486)
There are 22547 tests, see "Raw output" for the list of tests 6738 to 7486.
22547 tests found (test 7487 to 8226)
There are 22547 tests, see "Raw output" for the list of tests 7487 to 8226.
22547 tests found (test 8227 to 8889)
There are 22547 tests, see "Raw output" for the list of tests 8227 to 8889.
22547 tests found (test 8890 to 9637)
There are 22547 tests, see "Raw output" for the list of tests 8890 to 9637.
22547 tests found (test 9638 to 10495)
There are 22547 tests, see "Raw output" for the list of tests 9638 to 10495.
22547 tests found (test 10496 to 11378)
There are 22547 tests, see "Raw output" for the list of tests 10496 to 11378.
22547 tests found (test 11379 to 12143)
There are 22547 tests, see "Raw output" for the list of tests 11379 to 12143.
22547 tests found (test 12144 to 12957)
There are 22547 tests, see "Raw output" for the list of tests 12144 to 12957.
22547 tests found (test 12958 to 13766)
There are 22547 tests, see "Raw output" for the list of tests 12958 to 13766.
22547 tests found (test 13767 to 14626)
There are 22547 tests, see "Raw output" for the list of tests 13767 to 14626.
22547 tests found (test 14627 to 15388)
There are 22547 tests, see "Raw output" for the list of tests 14627 to 15388.
22547 tests found (test 15389 to 16015)
There are 22547 tests, see "Raw output" for the list of tests 15389 to 16015.
22547 tests found (test 16016 to 16635)
There are 22547 tests, see "Raw output" for the list of tests 16016 to 16635.
22547 tests found (test 16636 to 17224)
There are 22547 tests, see "Raw output" for the list of tests 16636 to 17224.
22547 tests found (test 17225 to 17915)
There are 22547 tests, see "Raw output" for the list of tests 17225 to 17915.
22547 tests found (test 17916 to 18545)
There are 22547 tests, see "Raw output" for the list of tests 17916 to 18545.
22547 tests found (test 18546 to 19367)
There are 22547 tests, see "Raw output" for the list of tests 18546 to 19367.
22547 tests found (test 19368 to 20041)
There are 22547 tests, see "Raw output" for the list of tests 19368 to 20041.
22547 tests found (test 20042 to 20739)
There are 22547 tests, see "Raw output" for the list of tests 20042 to 20739.
22547 tests found (test 20740 to 21486)
There are 22547 tests, see "Raw output" for the list of tests 20740 to 21486.
22547 tests found (test 21487 to 22300)
There are 22547 tests, see "Raw output" for the list of tests 21487 to 22300.
22547 tests found (test 22301 to 22547)
There are 22547 tests, see "Raw output" for the list of tests 22301 to 22547.

Artifacts

Produced during runtime
Name Size
Event File
3.96 KB
Test results for Linux-3.10
160 KB
Test results for Linux-3.10 bare-minimum
139 KB
Test results for Linux-3.10 min-all-deps
179 KB
Test results for Linux-3.10 mypy
870 Bytes
Test results for Linux-3.12 all-but-dask
187 KB
Test results for Linux-3.13
167 KB
Test results for Linux-3.13 all-but-numba
167 KB
Test results for Linux-3.13 flaky
658 Bytes
Test results for Linux-3.13 mypy
864 Bytes
Test results for Windows-3.10
166 KB
Test results for Windows-3.13
174 KB
Test results for macOS-3.10
165 KB
Test results for macOS-3.13
166 KB