[Documentation] Update links

[jan-janssen]

Summary by CodeRabbit

• Documentation
  • Reorganized HPC Cluster Executor documentation with new sections for disconnecting/reconnecting and cache management.
  • Renamed "Coupling with other Libraries" section to "Integration" for improved clarity.
  • Simplified integration guide headings for better readability.

[coderabbitai]

No actionable comments were generated in the recent review. 🎉

ℹ️ Recent review info

⚙️ Run configuration

Configuration used: defaults

Review profile: CHILL

Plan: Pro

Run ID: 8f897779-b43a-4625-b732-0add2c151c60

📥 Commits

Reviewing files that changed from the base of the PR and between d8456c4 and b12df80.

📒 Files selected for processing (2)

• README.md
• docs/coupling.md

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📝 Walkthrough

Walkthrough

This PR updates documentation naming and structure across the repository: the section "Coupling with other Libraries" is renamed to "Integration" with simplified subsection headings in docs/coupling.md, and the README's Documentation navigation is updated to reflect the new section name and add additional HPC Cluster Executor subsections.

Changes

Documentation: "Coupling with other Libraries" → "Integration" Rename

Layer / File(s)	Summary
Integration documentation structure and headings docs/coupling.md	The main document heading changed from "Coupling with other Libraries" to "Integration", and subsection headings for emcee, pipefunc, omp4py, and pylammpsmpi were simplified by removing descriptive parenthetical suffixes.
README navigation and HPC Cluster Executor subsections README.md	The Documentation navigation block replaced "Coupling with other Libraries" with "Integration" (updating anchor links and adding a "General Pattern" entry), and new subsection links were added under HPC Cluster Executor for disconnect/reconnect, combining both modes, and cleaning cache.

Estimated code review effort

🎯 1 (Trivial) | ⏱️ ~3 minutes

Possibly related PRs

• pyiron/executorlib#558: Both PRs modify README.md documentation structure and navigation around the HPC Cluster Executor section, including subsection alignment and anchor updates.
• pyiron/executorlib#506: Both PRs update README.md documentation navigation and hyperlink structure for HPC-related sections, though this PR additionally renames the "Coupling with other Libraries" documentation section.

Poem

🐰 A name change hops through the docs with care,
From "Coupling" to "Integration" everywhere,
Section headings trim their frilly dress,
README links align—clean, neat, and blessed! ✨

🚥 Pre-merge checks | ✅ 4 | ❌ 1

❌ Failed checks (1 inconclusive)

Check name	Status	Explanation	Resolution
Title check	❓ Inconclusive	The title '[Documentation] Update links' is vague and generic. While it mentions documentation and links, it doesn't convey what specific links were updated or describe the main structural changes (renaming sections, reorganizing navigation).	Consider a more descriptive title such as '[Documentation] Rename integration section and update navigation' to better reflect the actual changes made to the documentation structure.

✅ Passed checks (4 passed)

Check name	Status	Explanation
Description Check	✅ Passed	Check skipped - CodeRabbit’s high-level summary is enabled.
Docstring Coverage	✅ Passed	No functions found in the changed files to evaluate docstring coverage. Skipping docstring coverage check.
Linked Issues check	✅ Passed	Check skipped because no linked issues were found for this pull request.
Out of Scope Changes check	✅ Passed	Check skipped because no linked issues were found for this pull request.

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✨ Finishing Touches

🧪 Generate unit tests (beta)

• Create PR with unit tests
• Commit unit tests in branch doclinks

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[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 94.24%. Comparing base (d8456c4) to head (b12df80).

Additional details and impacted files

@@           Coverage Diff           @@
##             main    #1018   +/-   ##
=======================================
  Coverage   94.24%   94.24%           
=======================================
  Files          39       39           
  Lines        2119     2119           
=======================================
  Hits         1997     1997           
  Misses        122      122           

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