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Add documentation for all VariantHeader related classes#1394

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jmarshall merged 2 commits into
pysam-developers:masterfrom
TimD1:td_add-variant-header-docs
Apr 25, 2026
Merged

Add documentation for all VariantHeader related classes#1394
jmarshall merged 2 commits into
pysam-developers:masterfrom
TimD1:td_add-variant-header-docs

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@TimD1

@TimD1 TimD1 commented Mar 10, 2026

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Summary

This PR adds VCF documentation for the following classes:

  • VariantHeader
  • VariantHeaderMetadata
  • VariantHeaderRecords
  • VariantHeaderRecord
  • VariantHeaderContigs
  • VariantHeaderSamples

Notes

This PR is based on #1361, Github unfortunately does not allow stacking PRs from external branches cleanly. Please review documentation PRs in the following order: #1358, #1359, #1361, #1394. I can rebase after each merge.

@jmarshall jmarshall force-pushed the td_add-variant-header-docs branch from a5e9f72 to 8b6a6ab Compare April 12, 2026 12:57
Don't use "Returns" for properties, because they just *are* a value
rather than being functions returning a value.

Revert BaseIndex.get() to the original text, as I suspect this method
doesn't work at all.
@jmarshall jmarshall merged commit 9aa4d1a into pysam-developers:master Apr 25, 2026
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2 participants