Release 0.3.9

feature/299-remove-args-namespace-from-coveragent-constructor (#325)

* Introducing initial changes

* Rename max_run_time to max_run_time_sec

* Mark hardcoded values for check

* Refactor parse_args in main

* Add record_mode arg arter rebase

* Add CoverAgentConfig methods

* Rename max_run_time to max_run_time_sec

* Fix run-each-test-separately

* Add cover_agent/__main__

* Fix Docker scripts

* Update configurations.toml. Remove generated tests from Python test

* Update parsing args

* Code updates after rebase

* Fix previous unit tests. Add new unit tests

* Move more constants to configuration.toml

* Fix typing Self for Python 3.10 compatibility in config_schema

* Fix default values in configuration.toml

* Fix default included_files issue