Update Scientific Python dependencies per NEP-29 and SPEC-0

[pavoljuhas]

• drop numpy-1 per NEP-29 and SPEC-0
• drop matplotlib-3.8 per SPEC-0
• drop pandas-2.2 per SPEC-0
• drop ipython-8.16 per SPEC-0

Refs:

• https://numpy.org/neps/nep-0029-deprecation_policy.html
• https://scientific-python.org/specs/spec-0000

Resolves b/432284080

[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 99.37%. Comparing base (82d2cdc) to head (c39f68d).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files

@@            Coverage Diff             @@
##             main    #7675      +/-   ##
==========================================
- Coverage   99.37%   99.37%   -0.01%     
==========================================
  Files        1085     1085              
  Lines       96937    96937              
==========================================
- Hits        96331    96330       -1     
- Misses        606      607       +1     

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[mhucka]

LGTM and worked without trouble in my local Python 3.11 on MacOS.