HATCHet v1.0.2
This version of HATCHet
fixes a bug with the hatchet run
command, specifically when running the phase-snps
step. The order of arguments passed on to phase-snps
was incorrect. This would have shown up as an immediate error in hatchet run
. This has now been fixed.
The count-alleles
step has been slightly tweaked so that any underlying runtime errors in the step are propagated as exceptions to the caller, instead of (in many cases) the step seeming to take forever. This is expected to help in debugging previously-stalled scenarios when running this step.