Description
bug with docker image for version 87
An error was caught during BioPAX -- have you updated the Pathway-Exchange installation?
2023-12-01 19:43:06.863 [main] INFO org.reactome.release.downloaddirectory.GSEAOutput - Running GSEAOutput step
org.gk.schema.InvalidAttributeException: Invalid attribute 'summation' for class 'NegativeRegulation'.
at org.gk.schema.GKSchemaClass.isValidAttributeOrThrow(Unknown Source)
at org.gk.schema.GKSchemaClass.getAttribute(Unknown Source)
at org.gk.model.GKInstance.getAttributeValuesList(Unknown Source)
at org.reactome.biopax.ReactomeToBioPAXXMLConverter.handleEventSummation(Unknown Source)
at org.reactome.biopax.ReactomeToBioPAXXMLConverter.createModulationFromRegulation(Unknown Source)
at org.reactome.biopax.ReactomeToBioPAXXMLConverter.handleRegulation(Unknown Source)
at org.reactome.biopax.ReactomeToBioPAXXMLConverter.handleEvent(Unknown Source)
at org.reactome.biopax.ReactomeToBioPAXXMLConverter.handlePathwayComponents(Unknown Source)
Metadata
Metadata
Assignees
Labels
Type
Projects
Status
Activity