charmer-rs

A terminal user interface (TUI) for monitoring Snakemake pipelines on HPC clusters.

Features

• Real-time monitoring of Snakemake pipelines on SLURM and LSF clusters
• Interactive TUI with vim-style navigation
• Filtering, sorting, and log viewing

Installation

cargo install --git https://github.com/rnabioco/charmer-rs.git

Quick Start

# Monitor current directory
charmer

# Monitor specific directory
charmer /path/to/pipeline

Documentation

Full documentation is available at rnabioco.github.io/charmer-rs.

License

MIT License - see LICENSE for details.