4.0.1: bug fixes and improvements

[rusiaaman]

• Screen instances were not cleaned up
• Search replace didn't work when resolving based on future search replace blocks. Fixed and improved speed.
• Dynamically scaling up number of files shown in init
• ALIGNMENT.md file automatically gets included from project root.
• Prompt improvements.

[codecov-commenter]

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Codecov Report

Attention: Patch coverage is 81.08108% with 14 lines in your changes missing coverage. Please review.

Files with missing lines	Patch %	Lines
src/wcgw/client/tools.py	45.45%	6 Missing ⚠️
src/wcgw/client/file_ops/search_replace.py	79.16%	5 Missing ⚠️
src/wcgw/client/repo_ops/repo_context.py	85.00%	3 Missing ⚠️

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Files with missing lines	Coverage Δ
src/wcgw/client/bash_state/bash_state.py	81.76% <100.00%> (-0.04%)	⬇️
src/wcgw/client/file_ops/diff_edit.py	89.28% <100.00%> (+0.74%)	⬆️
src/wcgw/client/mcp_server/server.py	100.00% <100.00%> (ø)
src/wcgw/client/modes.py	92.42% <100.00%> (ø)
src/wcgw/client/repo_ops/repo_context.py	75.15% <85.00%> (+1.18%)	⬆️
src/wcgw/client/file_ops/search_replace.py	85.18% <79.16%> (-1.41%)	⬇️
src/wcgw/client/tools.py	77.25% <45.45%> (-0.66%)	⬇️

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