MetaProViz: METabolomics pre-PRocessing, functiOnal analysis and VIZualisation
This is a small package release V2.1.7. where we added:
- We extended the prior knwoledge vignette to showcase more pittfalls and how to deal with them.
- We have extended the documentation and removed some dependencies.
- We have also extended the CoRe and Standard vignette, and updated the overview figures.
- We have added more example data.
MetaProViz can analyse standard metabolomics and exometabolomics data (CoRe). It performs pre-processing including feature filtering, missing value imputation, normalisation and outlier detection. It perform functional analysis including differential metabolite analysis (DMA), clustering based on regulatory rules (MCA) and contains different visualisation methods to extract biological interpretable graphs and saves them in a publication ready format.