TOPMed_ref

Building a TOPMed gr38 reference panel.

Name		Name	Last commit message	Last commit date
Latest commit History 27 Commits
0_count_variants_all.sbatch		0_count_variants_all.sbatch
0_count_variants_all.sh		0_count_variants_all.sh
0_get_samples.sbatch		0_get_samples.sbatch
FHS_bug.txt		FHS_bug.txt
II_merge_bi_filt.sbatch		II_merge_bi_filt.sbatch
II_merge_bi_filt.sh		II_merge_bi_filt.sh
IIa_merge.sbatch		IIa_merge.sbatch
IIa_merge.sh		IIa_merge.sh
IIb_bi.sbatch		IIb_bi.sbatch
IIb_bi.sh		IIb_bi.sh
IIc_dense.sbatch		IIc_dense.sbatch
IIc_dense.sh		IIc_dense.sh
I_rename_bi.sbatch		I_rename_bi.sbatch
I_rename_bi.sh		I_rename_bi.sh
LICENSE		LICENSE
O_check_missingness.R		O_check_missingness.R
O_check_missingness.sbatch		O_check_missingness.sbatch
O_check_missingness_merge.sbatch		O_check_missingness_merge.sbatch
O_check_missingness_rename_bi.sbatch		O_check_missingness_rename_bi.sbatch
README.md		README.md
TOPmed_GRch38_frz8_paths.tsv		TOPmed_GRch38_frz8_paths.tsv
TOPmed_GRch38_frz8_paths_human_readable.tsv		TOPmed_GRch38_frz8_paths_human_readable.tsv
TOPmed_phasing.sbatch		TOPmed_phasing.sbatch
TOPmed_phasing.sh		TOPmed_phasing.sh
check_FHS_c1.sbatch		check_FHS_c1.sbatch
count_chr_vcf_check.sh		count_chr_vcf_check.sh
fix_vcf_names.sh		fix_vcf_names.sh
generate_merge_lists.sh		generate_merge_lists.sh
untar.sbatch		untar.sbatch
untar.sh		untar.sh

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