Germ Selection Gate Penalty#666

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coreyostrove wants to merge 4 commits intodevelopfrom

feature-germselection-gate-penalty

Commits on Sep 30, 2025

Add a new penalty term for gates
Corey Ostrove
committed

Commits on Oct 9, 2025

Add new option for penalizing gates in germ selection
Corey Ostrove
committed
More gate penalty updates, and new unit tests
Corey Ostrove
committed
Fix new unit tests
Corey Ostrove
committed