Develop into Master

[stevieing]

Closes #

Changes proposed in this pull request:

• Two plate sample sheets
• Only load config files of known pipelines
• Depfu updates
• Test refactoring
• Reduce test ouptput

[codecov]

Codecov Report

Merging #1071 (f935f40) into master (65e734e) will increase coverage by 0.06%.
Report is 11 commits behind head on master.
The diff coverage is 100.00%.

@@            Coverage Diff             @@
##           master    #1071      +/-   ##
==========================================
+ Coverage   97.46%   97.52%   +0.06%     
==========================================
  Files         349      349              
  Lines        9953    10159     +206     
==========================================
+ Hits         9701     9908     +207     
+ Misses        252      251       -1     

Files Changed	Coverage Δ
app/csv_generator/pacbio_sample_sheet.rb	94.44% <100.00%> (+2.77%)	⬆️
app/models/concerns/pipelineable.rb	100.00% <100.00%> (ø)
app/models/concerns/sample_sheet.rb	100.00% <100.00%> (ø)
app/pipelines/pipelines.rb	92.59% <100.00%> (+0.59%)	⬆️
app/validators/pipeline_validator.rb	100.00% <100.00%> (ø)
spec/csv_generator/pacbio_sample_sheet_spec.rb	100.00% <100.00%> (ø)
spec/factories/pacbio/runs.rb	100.00% <100.00%> (ø)
spec/lib/tasks_spec.rb	94.18% <100.00%> (+0.51%)	⬆️
spec/models/pacbio/well_spec.rb	100.00% <100.00%> (ø)
spec/pipelines/pacbio/sample_sheet_spec.rb	100.00% <100.00%> (ø)
... and 1 more

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[StephenHulme]

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