Optimizing IntegrateData Runtime #9814
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mohamadmilad
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Hi,
I'm currently working with a 350k cells across 51 datasets, with 40 markers. I use the integration workflow and I run FindIntegrationAnchors in parallel using the #future, and it completes in roughly 10 minutes BUT #IntegrateData takes approximately 2 days to run.
I was wondering if there are any alternative approaches, or optimizations (other than reference-based integration) that might help speed up this process?
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