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Feature Request: add back plot_convergence to Harmony

enhancementNew feature or requestNew feature or request

Status: Open.

#9815 In satijalab/seurat;

· NadineBestard opened on Apr 11, 2025

Feature Request: Improve DimHeatmap documentation and add PC number title for ggplot2 output

enhancementNew feature or requestNew feature or request

Status: Open.

#9810 In satijalab/seurat;

· dkcoxie opened on Apr 10, 2025

Issue with SCTransform [Error in rowAnys() ]

Status: Open.

#9809 In satijalab/seurat;

· krastegar opened on Apr 9, 2025

Unexpected number of genes identified with FindVariableFeatures()

Status: Open.

#9808 In satijalab/seurat;

· EliseCoopman opened on Apr 9, 2025

Documentation: Visium HD label transfer via ProjectData() predicts "Unknown" instead of projected types

documentationError in documentationError in documentation

Status: Open.

#9806 In satijalab/seurat;

· KidElectric opened on Apr 8, 2025

Issue in merging two SCTransformed Seurat objects in version 5

Status: Open.

#9802 In satijalab/seurat;

· KirSha06 opened on Apr 5, 2025

Issues with leiden? Switch to igraph implementation

Status: Open.

#9800 In satijalab/seurat;

· samuel-marsh opened on Apr 4, 2025

Enable Seurat to Handle Ultra-Large Matrices (>2^31 values)

enhancementNew feature or requestNew feature or request

Status: Open.

#9798 In satijalab/seurat;

· BenjaminDEMAILLE opened on Apr 2, 2025

Feature Request: Add Interactive Region Selector for SpatialDimPlot

enhancementNew feature or requestNew feature or request

Status: Open.

#9797 In satijalab/seurat;

· mayurdoke6 opened on Apr 2, 2025

Problem with plotting scale.data when DefaultAssay is set to RNA

Status: Open.

#9796 In satijalab/seurat;

· dizhengao opened on Apr 2, 2025

Splitting Seurat object creates massive increase in object size

Status: Open.

#9795 In satijalab/seurat;

· mesposit opened on Apr 2, 2025

The <scale> argument of guides() cannot be FALSE. Use "none" instead as of ggplot2 3.3.4.

bugSomething isn't workingSomething isn't working

Status: Open.

#9794 In satijalab/seurat;

· Ck-boo opened on Apr 1, 2025