chore: move to zarr#25
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Zethson
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One row per sentence please to make this more reviewable.
Zethson
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- A getting started tutorial should not have warnings like
/var/folders/k9/9wc7lvwj2g34_r74kn6cr0nr0000gn/T/ipykernel_12269/2319192822.py:5: FutureWarning: `__version__` is deprecated, use `importlib.metadata.version('anndata')` instead.
print(ad.__version__)and
/var/folders/k9/9wc7lvwj2g34_r74kn6cr0nr0000gn/T/ipykernel_12269/2822107891.py:2: FutureWarning: Automatic reshaping when setting X will be removed in the future.
adata[:3, 'Gene_1'].X = [0, 0, 0]
/var/folders/k9/9wc7lvwj2g34_r74kn6cr0nr0000gn/T/ipykernel_12269/2822107891.py:2: ImplicitModificationWarning: Setting element `.X` of view, initializing view as actual.
adata[:3, 'Gene_1'].X = [0, 0, 0]- Maybe we should have a dropdown that explains more details about hdf5 & zarr and when to use what?
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I added a bit more, but not sure why it should be a dropdown since the info is important. There's so much to say but I tried to wrap it up a bit into the main points - parallelism and async. |
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Turns out most of tutorials are using zarr anyway!