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name: TreeTag
description: |
Fast hierarchical cell-type tagging for single-cell data using YAML ontologies and marker dictionaries.
Works with AnnData/Scanpy. Includes marker pruning, KNN-based smoothing, and optional doublet detection.
project_home: https://github.com/valleyofdawn/TreeTag
documentation_home: https://github.com/valleyofdawn/TreeTag#readme
tutorials_home: https://github.com/valleyofdawn/TreeTag#readme
install:
pypi: treetag
tags:

  • annotation
  • cell-type
  • scanpy
  • markers
    license: MIT
    version: v0.1.1
    authors:
  • valleyofdawn
    test_command: |
    pip install . && pytest -q

meta yaml for treetag
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