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scverse / rustar-aligner Public

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feat: add `--outSAMattrRGline` with `@RG` header and `RG:Z` tags#6

Merged

Psy-Fer merged 8 commits into

scverse:mainscverse/rustar-aligner:mainfrom

ewels:feat/sam-rg-lineewels/rustar-aligner:feat/sam-rg-lineCopy head branch name to clipboard

Apr 20, 2026

Conversation Commits8 (8)Checks Files changed

Merged

feat: add `--outSAMattrRGline` with `@RG` header and `RG:Z` tags#6
Psy-Fer merged 8 commits into
scverse:mainfrom
ewels:feat/sam-rg-line

Commits

Commits on Apr 17, 2026

Add --outSAMattrRGline flag and emit @RG header + RG:Z tags

ewels
and
claude
committed
chore(simplify): drop dead rg_ids() call and redundant attrs gate

ewels
and
claude
committed
chore(simplify): introduce primary_rg_id helper for writer callsites

ewels
and
claude
committed
chore(simplify): rewrite parsed_rg_lines with Vec::split

ewels
and
claude
committed
chore: remove dead SamWriter::write_unmapped

ewels
and
claude
committed
chore: apply cargo fmt

ewels
and
claude
committed

Commits on Apr 20, 2026

Merge branch 'main' into feat/sam-rg-line
Psy-Fer
authored
Fix merge conflict squashing } braket
Psy-Fer
authored

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