ci: bump kaisugi/action-regex-match from 1.0.1 to 1.0.2 #1232
Workflow file for this run
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - "[0-9]+.[0-9]+.x" | |
| pull_request: | |
| env: | |
| PYTEST_ADDOPTS: "-v --color=yes -n auto --internet-tests --junitxml=test-data/test-results.xml" | |
| FORCE_COLOR: "1" | |
| MPLBACKEND: agg | |
| # It’s impossible to ignore SyntaxWarnings for a single module, | |
| # so because leidenalg 0.10.0 has them, we pre-compile things: https://github.com/vtraag/leidenalg/issues/173 | |
| UV_COMPILE_BYTECODE: "1" | |
| jobs: | |
| get-environments: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| envs: ${{ steps.get-envs.outputs.envs }} | |
| steps: | |
| - uses: actions/checkout@v6 | |
| with: { filter: 'blob:none', fetch-depth: 0 } | |
| - uses: astral-sh/setup-uv@v7 | |
| with: { enable-cache: false } | |
| - id: get-envs | |
| run: | | |
| ENVS_JSON=$(NO_COLOR=1 uvx hatch env show --json | jq -c 'to_entries | |
| | map( | |
| select(.key | startswith("hatch-test")) | |
| | { | |
| name: .key, | |
| "test-type": (if (.key | test("pre|min")) then "coverage" else null end), | |
| python: .value.python | |
| } | |
| )') | |
| echo "envs=${ENVS_JSON}" | tee $GITHUB_OUTPUT | |
| test: | |
| needs: get-environments | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| env: ${{ fromJSON(needs.get-environments.outputs.envs) }} | |
| steps: | |
| - uses: actions/checkout@v6 | |
| with: { filter: 'blob:none', fetch-depth: 0 } | |
| - uses: astral-sh/setup-uv@v7 | |
| with: | |
| python-version: ${{ matrix.env.python }} | |
| - name: Cache downloaded data | |
| uses: actions/cache@v4 | |
| with: | |
| path: .pytest_cache/d/scanpy-data | |
| key: pytest | |
| - name: Install dependencies | |
| run: | | |
| uv tool install --with='click!=8.3.0' hatch | |
| hatch -v env create ${{ matrix.env.name }} | |
| - name: Run tests | |
| if: matrix.env.test-type == null | |
| run: hatch run ${{ matrix.env.name }}:run | |
| - name: Run tests (coverage) | |
| if: matrix.env.test-type == 'coverage' | |
| run: | | |
| hatch run ${{ matrix.env.name }}:run-cov | |
| hatch run ${{ matrix.env.name }}:cov-combine | |
| hatch run ${{ matrix.env.name }}:coverage xml | |
| - name: Upload coverage data | |
| if: ${{ !cancelled() && matrix.env.test-type == 'coverage' }} | |
| uses: codecov/codecov-action@v5 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| flags: ${{ matrix.env.name }} | |
| fail_ci_if_error: true | |
| files: test-data/coverage.xml | |
| - name: Upload test results | |
| if: ${{ !cancelled() }} | |
| uses: codecov/test-results-action@v1 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| flags: ${{ matrix.env.name }} | |
| fail_ci_if_error: true | |
| file: test-data/test-results.xml | |
| - name: Publish debug artifacts | |
| if: ${{ !cancelled() }} | |
| uses: actions/upload-artifact@v5 | |
| with: | |
| name: debug-data-${{ matrix.env.name }} | |
| path: .pytest_cache/d/debug | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v6 | |
| with: { filter: 'blob:none', fetch-depth: 0 } | |
| - uses: actions/setup-python@v6 | |
| with: | |
| python-version: "3.x" | |
| - uses: astral-sh/setup-uv@v7 | |
| with: | |
| enable-cache: true | |
| - run: uvx --from build pyproject-build --sdist --wheel . | |
| - run: uvx twine check dist/* | |
| check: | |
| if: always() | |
| needs: | |
| - get-environments | |
| - test | |
| - build | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: re-actors/alls-green@release/v1 | |
| with: | |
| jobs: ${{ toJSON(needs) }} |