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Backport PR #4062: perf: `numba` based aggregations for sparse data

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Backport PR #4062 on branch 1.12.x (perf: numba based aggregations for sparse data) #4064

Backport PR #4062: perf: `numba` based aggregations for sparse data
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Codecov / codecov/project succeeded Apr 16, 2026 in 0s

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Codecov Report

❌ Patch coverage is 97.22222% with 1 line in your changes missing coverage. Please review.
⚠️ Please upload report for BASE (1.12.x@f2268d9). Learn more about missing BASE report.
✅ All tests successful. No failed tests found.

Files with missing lines Patch % Lines
src/scanpy/get/_aggregated.py 96.77% 1 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff            @@
##             1.12.x    #4064   +/-   ##
=========================================
  Coverage          ?   78.36%           
=========================================
  Files             ?      119           
  Lines             ?    12624           
  Branches          ?        0           
=========================================
  Hits              ?     9893           
  Misses            ?     2731           
  Partials          ?        0           
Files with missing lines Coverage Δ
src/scanpy/get/_kernels.py 100.00% <100.00%> (ø)
src/scanpy/get/_aggregated.py 93.30% <96.77%> (ø)