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Bump minimum Python version to 3.9, test with 3.8 - 3.10.

Status: Closed (abandoned).

scverse/scvi-toolsnumber 1708

#1708 In scverse/scvi-tools;

· by martinkim0 was closed on Dec 10, 2022

Implement latent mode for SCANVI + allow models w/o size_factor_key to be latent-ify-able

Status: Merged (completed).

scverse/scvi-toolsnumber 1779

#1779 In scverse/scvi-tools;

· by watiss was closed on Jan 20, 2023

Latent mode refactoring

Status: Merged (completed).

scverse/scvi-toolsnumber 1756

#1756 In scverse/scvi-tools;

· by adamgayoso was closed on Dec 2, 2022

Add scvi hub — built on huggingface 🤗

Status: Merged (completed).

scverse/scvi-toolsnumber 1812

#1812 In scverse/scvi-tools;

· by watiss was closed on Dec 21, 2022

Generalize <code>obs</code> and <code>obsm</code> fields to <code>var</code> and <code>varm</code>

Status: Closed (abandoned).

scverse/scvi-toolsnumber 1821

#1821 In scverse/scvi-tools;

· by martinkim0 was closed on Jan 3, 2023

New fields: numerical var and varm

Status: Closed (abandoned).

scverse/scvi-toolsnumber 1810

#1810 In scverse/scvi-tools;

· by vitkl was closed on Dec 12, 2022

Deprecated setup_anndata in stereoscope.

Status: Merged (completed).

scverse/scvi-toolsnumber 1804

#1804 In scverse/scvi-tools;

· by canergen was closed on Mar 7, 2023

fix issue with cuda compatibility on ZINB sampling

Status: Merged (completed).

scverse/scvi-toolsnumber 1813

#1813 In scverse/scvi-tools;

· by saroudant was closed on Dec 10, 2022

Refactor Lightning logged metrics

Status: Closed (abandoned).

scverse/scvi-toolsnumber 1806

#1806 In scverse/scvi-tools;

· by martinkim0 was closed on Jan 3, 2023

Generalize <code>DataFrame</code> and <code>ArrayLike</code> fields

Status: Merged (completed).

scverse/scvi-toolsnumber 1830

#1830 In scverse/scvi-tools;

· by martinkim0 was closed on Jan 5, 2023

Backport PR #1804 on branch 0.20.x (Deprecated setup_anndata in stereoscope.)

Status: Merged (completed).

scverse/scvi-toolsnumber 1948

#1948 In scverse/scvi-tools;

· by meeseeksmachine was closed on Mar 7, 2023

Bump minimum python to 3.8 and test 3.8,3.9,3.10

Status: Closed (completed).

#1705 In scverse/scvi-tools;

· by adamgayoso was closed on Dec 12, 2022

Address Lightning warnings

bug

Status: Closed (completed).

#1832 In scverse/scvi-tools;

· by martinkim0 was closed on Jan 4, 2023

Implement GitHub Codespaces dev container

enhancement

Status: Closed (completed).

#1835 In scverse/scvi-tools;

· by martinkim0 was closed on Jan 31, 2023

Define <code>_tunables</code> class property at the base level

enhancement

Status: Closed (completed).

#1799 In scverse/scvi-tools;

· by martinkim0 was closed on Jan 20, 2023