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Add method to calculate embeddings for variable by distance aggregation #1555

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Add method to calculate embeddings for variable by distance aggregation

Add method to calculate embeddings for variable by distance aggregation #1555

Triggered via pull request May 9, 2025 20:32
@pre-commit-cipre-commit-ci[bot]
synchronize #807
var_by_distance_clustering
Status Failure
Total duration 2m 12s
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test.yml

on: pull_request
Matrix: test
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4 errors and 8 warnings
test (3.12, macos-latest, --pre, Python 3.12 (pre-release))
Process completed with exit code 4.
test (3.11, ubuntu-latest)
Process completed with exit code 4.
test (3.12, ubuntu-latest)
Process completed with exit code 4.
test (3.10, ubuntu-latest)
Process completed with exit code 4.
test (3.12, macos-latest, --pre, Python 3.12 (pre-release))
No files were found with the provided path: /home/runner/work/squidpy/squidpy/tests/figures/*. No artifacts will be uploaded.
test (3.12, macos-latest, --pre, Python 3.12 (pre-release))
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (3.11, ubuntu-latest)
No files were found with the provided path: /home/runner/work/squidpy/squidpy/tests/figures/*. No artifacts will be uploaded.
test (3.11, ubuntu-latest)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (3.12, ubuntu-latest)
No files were found with the provided path: /home/runner/work/squidpy/squidpy/tests/figures/*. No artifacts will be uploaded.
test (3.12, ubuntu-latest)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (3.10, ubuntu-latest)
No files were found with the provided path: /home/runner/work/squidpy/squidpy/tests/figures/*. No artifacts will be uploaded.
test (3.10, ubuntu-latest)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/