remove the tutorials folder as it has too much dependencies

selmanozleyen · selmanozleyen · commit 77c7ecad9234 · 2025-07-01T00:50:19.000+02:00
diff --git a/.run_notebooks.sh b/.run_notebooks.sh
@@ -15,7 +15,7 @@ declare -a notebooks=(
     "$base_dir/examples/plotting/*.ipynb"
     "$base_dir/examples/image/*.ipynb"
     "$base_dir/examples/graph/*.ipynb"
-    "$base_dir/tutorials/*.ipynb"
+    # "$base_dir/tutorials/*.ipynb" don't include because it contains many external modules
 )
 
 # Initialize an array to hold valid notebook paths
diff --git a/tox.ini b/tox.ini
@@ -153,6 +153,7 @@ deps =
     nbconvert
     leidenalg
     watermark
+    napari-spatialdata
 extras = docs,neural
 changedir = {tox_root}{/}docs
 commands =

Original file line number	Diff line number	Diff line change
`@@ -15,7 +15,7 @@ declare -a notebooks=(`
`15`	`15`	`"$base_dir/examples/plotting/*.ipynb"`
`16`	`16`	`"$base_dir/examples/image/*.ipynb"`
`17`	`17`	`"$base_dir/examples/graph/*.ipynb"`
`18`		`- "$base_dir/tutorials/*.ipynb"`
	`18`	`+ # "$base_dir/tutorials/*.ipynb" don't include because it contains many external modules`
`19`	`19`	`)`
`20`	`20`
`21`	`21`	`# Initialize an array to hold valid notebook paths`