v1.0

What's New

• Windows compatibility: Added portable implementations of strptime and getopt for Windows builds
• GenBank 2024 support: Added support for /geo_loc_name qualifier in addition to /country
• Memory leak fixes: Fixed memory leaks when processing badly formatted GenBank files
• Build options: Support for WSL, MSYS2/MinGW, PCRE2, and TRE on Windows

Building

Linux/macOS

make

Windows

See README.md for build instructions using WSL (recommended), MSYS2, or Visual Studio with PCRE2.

Usage

gbmunge -i <genbank_file> -f <fasta_output> -o <metadata_output> [-t] [-s]