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326 Task Calculate Evaluations over Windows#344

Merged
ibevers merged 25 commits into
276-feature-implement-bioacoustic-quality-control-frameworkfrom
326-task-calculate-metrics-over-windows
Aug 11, 2025
Merged

326 Task Calculate Evaluations over Windows#344
ibevers merged 25 commits into
276-feature-implement-bioacoustic-quality-control-frameworkfrom
326-task-calculate-metrics-over-windows

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@ibevers ibevers commented Jun 9, 2025 •
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Description

Depends on: #322
Depended on by: #345

  • Adds calculation of evaluations (metrics and checks) over windows.
  • Updates the storage of file-specific quality evaluation data to JSON.
  • Updates aggregated quality data to two files, one with windowed evaluations, and one without.
  • Balances human and machine readability.

Related Issue(s)

Motivation and Context

How Has This Been Tested?

Screenshots (if appropriate):

Types of changes

  • Bug fix (non-breaking change which fixes an issue)
  • New feature (non-breaking change which adds functionality)
  • Breaking change (fix or feature that would cause existing functionality to change)

Checklist:

  • I have added tests to cover my changes.
  • All new and existing tests passed.
  • My code follows the code style of this project.

ibevers added 24 commits June 6, 2025 13:38
@ibevers
Move get_metric to evaluate module
0779ed9
@ibevers
Make function naming more consistent
490e1f9
@ibevers
Move evaluate functions to evaluate module
7787095
@ibevers
Rename get_metric evaluate_metric
d6d777e
@ibevers
Rename bioacoustic_qc quality_control
8eb9f06
@ibevers
Rename get_metric get_evaluation
3b65417
@ibevers
Update evaluate_audio to use get_evaluation
8e84671
@ibevers
Move results loading logic to evaluate_audio
551461c
@ibevers
Update to store evaluations in JSON
78237bc
@ibevers
Add windowed evaluations
3453efb
@ibevers
Add get_windowed_evaluation function
d8b0546
@ibevers
Add window reuse in get_evaluation
98b6f78
@ibevers
Add windowing by default
cb5ec07
@ibevers
Avoid redundant storage of timestamps
5037bfd
@ibevers
Update metrics in storage fields to evaluations
412c0aa
@ibevers
Add windowing arguments to check_quality
aeee5be
@ibevers
Streamline evaluate_audio
bc24c04
@ibevers
Update quality control tests
0752d7d
@ibevers
Fix issues associated with failing tests
98ffb1b
@ibevers
Move evaluate.py tests to their own file
7c52bd5
@ibevers
Improve testing of evaluate.py functions
2765639
@ibevers
Improve save formatting
50d4bcc
@ibevers
Add format_test.py
1b832bb
@ibevers
Update default window size and hop to be more sensible
2d7b911
@ibevers ibevers changed the title 326 task calculate evaluations over windows 326 Task Calculate Evaluations over Windows Jun 10, 2025
@ibevers ibevers added enhancement New feature or request to-test python Pull requests that update Python code labels Jun 10, 2025
This was referenced Jun 11, 2025
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Closed
@ibevers ibevers self-assigned this Jul 18, 2025
@ibevers
Merge branch '276-feature-implement-bioacoustic-quality-control-frame…
37f295d 
…work' into 326-task-calculate-metrics-over-windows
@ibevers
ibevers merged commit 5528b6d into 276-feature-implement-bioacoustic-quality-control-framework Aug 11, 2025
9 of 15 checks passed
@fabiocat93
fabiocat93 deleted the 326-task-calculate-metrics-over-windows branch October 28, 2025 15:25
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