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seqan / dream-stellar Public

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[FEAT] Adaptive seeding for each pattern#144

Draft

eaasna wants to merge 11 commits into

mainseqan/dream-stellar:mainfrom

pattern_eachseqan/dream-stellar:pattern_eachCopy head branch name to clipboard

Conversation Commits11 (11)Checks Files changed

Draft

[FEAT] Adaptive seeding for each pattern#144
eaasna wants to merge 11 commits into
mainfrom
pattern_each

Commits

Commits on Jul 8, 2025

Do not write empty output files
eaasna
committed
Fix environment variable
eaasna
committed
Adapt threshold for each pattern
eaasna
committed
Cleaner output log
eaasna
committed
Fix adaptive seeding
eaasna
committed
Try to adapt threshold based on sample of patterns
eaasna
committed
Adapt threshold by mean
eaasna
committed
Remove each pattern debugging
eaasna
committed
Increment each
eaasna
committed
Debug
eaasna
committed
Update for all patterns per query
eaasna
committed

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